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DNA methylation alone does not cause most cell-type selective transcription factor binding

Authors: Matthew T Maurano, Hao Wang, Anthony Shafer, Sam John and John A Stamatoyannopoulos

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P103

Content type: Poster presentation Published on: 18 March 2013

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Abrogation of Brd4 cellular function contributes to the oncogenic mechanisms of translocation t(15;19)-associated carcinoma

Authors: Ranran Wang, Christine M Heifer and Jianxin You

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P101

Content type: Poster presentation Published on: 18 March 2013

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Bookmarking by specific and nonspecific binding of FoxA1 pioneer factor to mitotic chromosomes

Authors: Juan Manuel Caravaca, Greg Donahue, Justin S Becker and Kenneth S Zaret

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P94

Content type: Poster presentation Published on: 18 March 2013

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Mating type specific chromosome conformation in Saccharomyces cerevisiae

Authors: Jon-Matthew Belton, Davide Bau, Imen Lassardi, Kerstin Bystricky, Marc Marti-Renom and Job Dekker

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P92

Content type: Poster presentation Published on: 18 March 2013

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LncRNAs expression signatures of cadmium-induced malignant transformation of human bronchial epithelial cells revealed by microarray

Authors: Zhi-heng Zhou, Cai-xia Wang, Yi-xiong Lei, Hai-bai Liu and Min Wang

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P90

Content type: Poster presentation Published on: 18 March 2013

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Genome-wide analysis reveals TET-and TDG-mediated 5-methylcytosine oxidation dynamics

Authors: Li Shen, Hao Wu, Dinh Diep, Ana C D’Alessio, Alan Fung, Kun Zhang and Yi Zhang

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P88

Content type: Poster presentation Published on: 18 March 2013

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DNA methylation markers for disease progression and survival in Barrett’s Esophagus

Authors: Marc Taenzer, Michael Quante, Magdalena Liebl and Roland M Schmid

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P81

Content type: Poster presentation Published on: 18 March 2013

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Disruption of CTCF at the miR-125b1 locus in gynecological cancers and breast cancer cell lines

Authors: Ernesto Soto-Reves, Fernanda Cisneros-Soberanis, Iliana Alcalá Moreno, Rodrigo Gonzaílez Barrios, David Cantú de León, Clementina Castro and Luis A Herrera

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P79

Content type: Poster presentation Published on: 18 March 2013

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Genome-wide analysis reveals TET-and TDG-mediated 5-methylcytosine oxidation dynamics

Authors: Li Shen, Hao Wu, Dinh Diep, Ana C D’Alessio, Alan Fung, Kun Zhang and Yi Zhang

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P75

Content type: Poster presentation Published on: 18 March 2013

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Spatial organization and nuclear positioning of murine immunoglobulin loci in developing B cells

Authors: Magdalena B Rother, Kevin AM van Kester, Jacgues JM van Dongen, Cornells Murre and Menno C van Zelm

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P71

Content type: Poster presentation Published on: 18 March 2013

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Identifying candidate ncRNAs that direct changes in chromatin structure

Authors: Mridula K Ray, Yanqun Wang, Mark Borowsky, Ruslan Sadreyev and Robert E Kingston

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P69

Content type: Poster presentation Published on: 18 March 2013

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Transcriptome dysregulation and epigenome signature responses in hepatocytes upon hepatitis B virus infection and therapy

Authors: Andreas Klein, Lisa Wiluhn, Theodor Winkler, Timo Deba, Valerie Orth, Kai Hensel, Andreas Jenke, Stefan Wirth and Jan Postberg

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P67

Content type: Poster presentation Published on: 18 March 2013

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Nuclear envelope laminopathies: evidence for developmentally inappropriate chromatin-nuclear envelope interactions

Authors: Jelena Perovanovic, Jyoti Jaiswal, Nikola Markovic and Eric Hoffman

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P65

Content type: Poster presentation Published on: 18 March 2013

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Silencing subtelomeric VSGs by Trypanosoma brucei RAP1 at the insect stage involves chromatin structure changes

Authors: Unnati M Pandya, Ranjodh Sandhu and Bibo Li

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P63

Content type: Poster presentation Published on: 18 March 2013

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Developmental regulation of nucleoplasmin function by phosphorylation, glutamylation, and methylation

Authors: Takashi Onikubo, Joshua J Nicklav, Wei-Lin Wang, Jeffrey Shabanowitz, Donald F Hunt and David Shechter

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P61

Content type: Poster presentation Published on: 18 March 2013

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System-wide studies of the transcriptional programming of chromatin during early hematopoietic development

Authors: Nadine Obier, Mahalingam S Vijayabaskar, Stella Pearson, Maarten Hoogenkamp, Monika Lichtinger, Pierre Cauchy, David Westhead, Valerie Kouskoff, Georges Lacaud, Bertie Gottgens and Constanze Bonifer

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P59

Content type: Poster presentation Published on: 18 March 2013

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To be or not to be a Queen: the dark side of the ant genome

Authors: Claire Morandin, Yutaka Watanabe, Misato Okamoto, Man Ying Tin and Alexander Sasha Mikheyev

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P55

Content type: Poster presentation Published on: 18 March 2013

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MeCP2 binds to 5hmc enriched within active genes and accessible chromatin in the nervous system

Authors: Marian Mellen, Pinar Ayata, Scott Dewell, Skirmantas Kriaucionis and Nathaniel Heintz

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P52

Content type: Poster presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Integrated analyses of chromatin accessibility and gene expression data for elucidating the transcriptional regulatory mechanisms during early hematopoietic development in mouse

Authors: Mahalingam S Viiavabaskar, Nadine Obier, Stella Pearson, Maarten Hoogenkamp, Monika Lichtinger, Georges Lacaud, Valerie Kouskoff, Bertie Gottgens, Constanze Bonifer and David R Westhead

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P50

Content type: Poster presentation Published on: 18 March 2013

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Elucidating the mechanisms underlying GATA-1 activity

Authors: Roland Gamsjaeger, Ana Silva, Nicholas Shepherd, Lorna Wilkinson-White, Ernest Laue, Gerd Blobel, Jacgui Matthews and Joel Mackav

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P49

Content type: Poster presentation Published on: 18 March 2013

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Abstract not submitted for online publication

Authors: Chi-Hua Lee

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P44

Content type: Poster presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Folding principles of genomes

Authors: Job Dekker

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O40

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Prior epigenetic priming of cytokine genes in naive T cells is required for their subsequent activation by inducible enhancers

Authors: Sally R James, Sarah L Bevington, Fabio Mirabella, Marjorie Boissinot, Euan W Baxter, Sarion R Bowers and Peter N Cockerill

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O38

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Deciphering the evolutionary origin of the RB1 imprint

Authors: Deniz Kanber, Christian Roos, Jörg Gromoll, Bernhard Horsthemke, Dietmar Lohmann and Karin Buiting

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P38

Content type: Poster presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Epigenetic genome control by heterochromatin and RNAi machinery

Authors: Shiv Grewal

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O32

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Effect of cell separation on gene expression and DNA methylation profiles in intestinal epithelial cells

Authors: M Molitor, J Postberg, V Orth, M Zilbauer and AC Jenke

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P32

Content type: Poster presentation Published on: 18 March 2013

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Towards a causative function of histone modifications in regulation of chromatin dynamics and transcription

Authors: Philipp Tropberger, Sebastian Pott, Kinga Kamieniarz, Matthieu Caron, Edison T Liu, Raphael Margueron and Robert Schneider

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O30

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Pioneer transcription factor FoxA is positioned on hypersensitive nucleosomes at active enhancers

Authors: Makiko Iwafuchi-Doi, Greg Donahue, Jason Watts, Isabel Cuesta and Kenneth S Zaret

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P30

Content type: Poster presentation Published on: 18 March 2013

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Co-transcriptional histone methylations

Authors: Stephen Buratowski

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O28

Content type: Oral presentation Published on: 18 March 2013

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Heterochromatic silencing in Drosophila melanogaster

Authors: Sarah CR Elgin, Tingting Gu and Kiri Ulmschneider

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O26

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Gene dosage in mammals: characterization of haploid embryonic stem cells

Authors: Anton Wutz and Martin Leeb

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O24

Content type: Oral presentation Published on: 18 March 2013

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The role of TRIM24 during prostate cancer progression

Authors: Anna C Groner and Myles Brown

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P24

Content type: Poster presentation Published on: 18 March 2013

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The structure of Polycomb-repressed chromatin in the bithorax complex

Authors: Sarah K Bowman, Aimee M Deaton, Heber Domingues, Welcome Bender and Robert E Kingston

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O22

Content type: Oral presentation Published on: 18 March 2013

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Function of HP1 proteins as a component in kinetochore formation and its relation with chromosome instability

Authors: Rodrigo González-Barrios, Ernesto Soto-Reyes, Julia Medoza Perez, Alejandro Lopez-Saavedra, Clementina H Castro and Luis A Herrera

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P22

Content type: Poster presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Reprogramming the chromain landscape at eukaryotic regulatory elements

Authors: Gordon L Hager

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O20

Content type: Oral presentation Published on: 18 March 2013

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Locus-specific biochemical epigenetics/chromatin biochemistry by insertional chromatin immnoprecipitation (iChIP)

Authors: Toshitsugu Fujita and Hodaka Fujii

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P20

Content type: Poster presentation Published on: 18 March 2013

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Chromatin modifications and dynamics during repair of a double-strand chromosome break in budding yeast

Authors: James E Haber, Cheng-Sheng Lee, Kihoon Lee, Michael Tsabar, Wade Hicks and Gaelle Legube

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O16

Content type: Oral presentation Published on: 18 March 2013

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Polycomb-independent activity of EZH2 in castration resistant prostate cancer

Authors: Kexin Xu, Zhenhua Jeremy Wu, Anna C Groner, Housheng Hansen He, Changmeng Cai, Edward C Stack, Massimo Loda, Tao Liu, Colm Morrissey, Robert L Vessella, Philip W Kantoff, Steven P Balk, X Shirley Liu and Myles Brown

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O14

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Pausing as a mechanism of nucleosome recovery

Authors: Han-Wen Chang, Olga I Kulaeva, Alexey Shaytan, M Kibanov, K Severinov, David J Clark and Vasily M Studitsky

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P14

Content type: Poster presentation Published on: 18 March 2013

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Control of androgen receptor action by a novel nuclear receptor binding motif in Bag-1L

Authors: Laura Cato, Katja Jehle, Antje Neeb, Andrew CB Cato and Myles Brown

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P13

Content type: Poster presentation Published on: 18 March 2013

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Identification of promoter targets of enhancers by epigenetic knockdown using TAL DNA binding proteins

Authors: Eric M Mendenhall, Kaylyn Williamson, Deepak Reyon, J Keith Joung and Bradley E Bernstein

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O12

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax

Authors: John R Bracht, David H Perlman and Laura F Landweber

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P8

Content type: Poster presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Hydroxymethylated cytosine in development and disease

Authors: Gerd P Pfeifer

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O8

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Abstract not submitted

Authors:

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O7

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Association of modified cytosines and the methylated DNA-binding protein MeCP2 with distinctive structural domains of lampbrush chromatin

Authors: Garry T Morgan, Peter L Jones and Michel Bellini

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P6

Content type: Poster presentation Published on: 18 March 2013

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Abstract not submitted for online publication

Authors:

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O5

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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Genome-wide analysis of chromatin architecture in Oxytricha trifallax: a single-celled eukaryote with 16,000 tiny chromosomes

Authors: Leslie Y Beh and Laura F Landweber

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P4

Content type: Poster presentation Published on: 18 March 2013

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Histone modifications regulate DNA replication coupled nucleosome assembly

Authors: Junhong Han, Qing Li, Hui Zhou and Zhiguo Zhang

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O3

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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DNA methylation analysis at imprinted locus and global methylation in spermatozoa of normozoospermic individuals of idiopathic Recurrent Spontaneous Miscarriage

Authors: Mandar M Ankolkar, Himangi Warke, Vinita Salvi, Neelam K Mokashi and NH Balasinor

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):P2

Content type: Poster presentation Published on: 18 March 2013

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The mechanism and consequences of chromatin assembly and disassembly

Authors: Jessica Tyler

Citation: Epigenetics & Chromatin 2013 6(Suppl 1):O1

Content type: Oral presentation Published on: 18 March 2013

This article is part of a Supplement: Volume 6 Supplement 1
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