Skip to main content

Table 3 DMCs and DMRs in Flv1-treated and control group for each generation

From: The methylome of Biomphalaria glabrata and other mollusks: enduring modification of epigenetic landscape and phenotypic traits by a new DNA methylation inhibitor

Generation q value = 0.05, difference = 15%
DMCs
q value = 1.0, difference = 4%
DMCs
q value = 0.05, difference = 15%
Hypomethylated
DMCs
q value = 1.0, difference = 4%
Hypomethylated DMCs
q value = 0.05, difference = 15%
Hypermethylated DMCs
q value = 1.0, difference = 4%
Hypermethylated DMCs
F0 44 245 31 153 13 92
F1 332 1900 207 1153 125 747
F0 and F1 6 41 6 23 0 18
Generation q value = 0.05, difference = 15%
DMRs
q value = 1, difference = 4%
DMRs
q value = 0.0.5, difference = 15%
Hypomethylated
DMRs
q value = 0.1, difference = 4%
Hypomethylated DMRs
q value = 0.0.5, difference = 15%
Hypermethylated DMRs
q value = 0.1, difference = 4%
Hypermethylated DMRs
F0 10 32 6 17 4 15
F1 51 345 38 200 13 145
F0 and F1 1 7 1 5 0 2
  1. Two setting parameters were used to calculate the DMCs, the strict parameters with a q value < 0.05 and a cutoff of 15% methylation difference and the adapted parameters with a q value < 1 and a cutoff of 4%