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Table 3 DMCs and DMRs in Flv1-treated and control group for each generation

From: The methylome of Biomphalaria glabrata and other mollusks: enduring modification of epigenetic landscape and phenotypic traits by a new DNA methylation inhibitor

Generation

q value = 0.05, difference = 15%

DMCs

q value = 1.0, difference = 4%

DMCs

q value = 0.05, difference = 15%

Hypomethylated

DMCs

q value = 1.0, difference = 4%

Hypomethylated DMCs

q value = 0.05, difference = 15%

Hypermethylated DMCs

q value = 1.0, difference = 4%

Hypermethylated DMCs

F0

44

245

31

153

13

92

F1

332

1900

207

1153

125

747

F0 and F1

6

41

6

23

0

18

Generation

q value = 0.05, difference = 15%

DMRs

q value = 1, difference = 4%

DMRs

q value = 0.0.5, difference = 15%

Hypomethylated

DMRs

q value = 0.1, difference = 4%

Hypomethylated DMRs

q value = 0.0.5, difference = 15%

Hypermethylated DMRs

q value = 0.1, difference = 4%

Hypermethylated DMRs

F0

10

32

6

17

4

15

F1

51

345

38

200

13

145

F0 and F1

1

7

1

5

0

2

  1. Two setting parameters were used to calculate the DMCs, the strict parameters with a q value < 0.05 and a cutoff of 15% methylation difference and the adapted parameters with a q value < 1 and a cutoff of 4%