Table 5 GO biological process terms and genes that were enriched among differentially expressed genes in ventricles from juvenile snapping turtles
locus_number (in snapping turtle) | gene_name | gene_symbol |
|---|---|---|
Sarcomere organization | ||
 CS000009788 | Bone morphogenetic protein 10 | BMP10 |
 CS000018274 | Cysteine and glycine rich protein 1 | CSRP1 |
 CS000002632 | Cysteine and glycine rich protein 3 | CSRP3 |
 CS000023885 | Formin homology 2 domain containing 3 | FHOD3 |
 CS000019220 | Keratin 8 | KRT8 |
 CS000005252 | Myomesin 3 | MYOM3 |
 CS000000499 | Myopalladin | MYPN |
 CS000000944 | Troponin T2, cardiac type | TNNT2 |
Cell adhesion = biological adhesion | ||
 CS000007175 | Adhesion G protein-coupled receptor L3 | ADGRL3 |
 CS000009633 | Activated leukocyte cell adhesion molecule | ALCAM |
 CS000004780 | Amyloid beta precursor protein-binding family A member 1 | APBA1 |
 CS000009788 | Bone morphogenetic protein 10 | BMP10 |
 CS000003073 | Cadherin 11, type 2, OB-cadherin (osteoblast) | CDH11 |
 CS000003093 | Cadherin 13 | CDH13 |
 CS000014745 | Cadherin EGF LAG seven-pass G-type receptor 3 | celsr3 |
 CS000008605 | Contactin associated protein 1 | CNTNAP1 |
 CS000002886 | Collagen type XV alpha 1 chain | COL15A1 |
 CS000014058 | Collagen, type XVIII, alpha 1 | COL18A1 |
 CS000004853 | Collagen type III alpha 1 chain | COL3A1 |
 CS000025399 | Collagen type IV alpha 6 chain | COL4A6 |
 CS000009656 | Collagen type VIII alpha 1 chain | COL8A1 |
 CS000018274 | Cysteine and glycine rich protein 1 | CSRP1 |
 CS000007341 | Catenin delta 1 | CTNND1 |
 CS000021606 | Ependymin related 1 | EPDR1 |
 CS000003405 | Fibronectin 1 | FN1 |
 CS000001877 | Glycoprotein nmb | GPNMB |
 CS000018642 | Hyaluronan-binding protein 2 | HABP2 |
 CS000007378 | Heat shock protein family B (small) member 1 | HSPB1 |
 CS000012953 | Immunoglobulin superfamily containing leucine-rich repeat | ISLR |
 CS000008411 | Integrin subunit alpha 11 | ITGA11 |
 CS000009567 | Keratin 18 | KRT18 |
 CS000017005 | Muskelin 1 | MKLN1 |
 CS000020271 | Myosin, light chain 12A, regulatory, non-sarcomeric | MYL12A |
 CS000000499 | myopalladin | MYPN |
 CS000008885 | Neural precursor cell expressed, developmentally down-regulated 9 | NEDD9 |
 CS000018597 | Neurexin 2 | NRXN2 |
 CS000002394 | Neurotrimin | NTM |
 CS000019311 | Protein kinase C alpha | PRKCA |
 CS000011090 | Secreted phosphoprotein 1 | SPP1 |
 CS000020166 | Tweety family member 1 | TTYH1 |
 CS000020993 | TYRO3 protein tyrosine kinase | TYRO3 |
Signal transduction | ||
 CS000017075 | Adhesion G protein-coupled receptor D2 | ADGRD2 |
 CS000009646 | Adhesion G protein-coupled receptor G7 | ADGRG7 |
 CS000007175 | Adhesion G protein-coupled receptor L3 | ADGRL3 |
 CS000003393 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | AGAP1 |
 CS000009633 | Activated leukocyte cell adhesion molecule | ALCAM |
 CS000011198 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 | APPL1 |
 CS000002385 | Rho GTPase-activating protein 32 | ARHGAP32 |
 CS000021833 | Rho GTPase activating protein 45 | ARHGAP45 |
 CS000023302 | Cdc42 guanine nucleotide exchange factor 9 | ARHGEF9 |
 CS000003395 | Ankyrin repeat and SOCS box containing 18 | ASB18 |
 CS000001723 | ATM serine/threonine kinase | ATM |
 CS000013883 | BCL tumor suppressor 7B | BCL7B |
 CS000009788 | Bone morphogenetic protein 10 | BMP10 |
 CS000004917 | Bone morphogenetic protein receptor type 2 | BMPR2 |
 CS000014425 | B-Raf proto-oncogene, serine/threonine kinase | BRAF |
 CS000009112 | Calcium-binding protein 5 | CABP5 |
 CS000023033 | Calcitonin receptor | CALCR |
 CS000004923 | CD28 molecule | CD28 |
 CS000003093 | Cadherin 13 | CDH13 |
 CS000014745 | Cadherin EGF LAG seven-pass G-type receptor 3 | celsr3 |
 CS000006114 | chordin like 1 | CHRDL1 |
 CS000008605 | Contactin associated protein 1 | CNTNAP1 |
 CS000002886 | Collagen type XV alpha 1 chain | COL15A1 |
 CS000004853 | Collagen type III alpha 1 chain | COL3A1 |
 CS000025399 | Collagen type IV alpha 6 chain | COL4A6 |
 CS000009979 | Cysteine rich transmembrane BMP regulator 1 | CRIM1 |
 CS000011960 | Crystallin alpha B | CRYAB |
 CS000002632 | Cysteine and glycine rich protein 3 | CSRP3 |
 CS000007341 | Catenin delta 1 | CTNND1 |
 CS000003128 | Cytochrome b-245 alpha chain | CYBA |
 CS000005867 | Epidermal growth factor receptor pathway substrate 8 | EPS8 |
 CS000008545 | Erb-b2 receptor tyrosine kinase 2 | ERBB2 |
 CS000012011 | Coagulation factor III, tissue factor | F3 |
 CS000002168 | Fibroblast growth factor receptor 3 | FGFR3 |
 CS000003405 | Fibronectin 1 | FN1 |
 CS000002902 | Gamma-aminobutyric acid type B receptor subunit 1 | GABBR1 |
 CS000008168 | Glucagon | GCG |
 CS000005687 | G protein subunit alpha 12 | GNA12 |
 CS000013318 | G protein subunit gamma 10 | GNG10 |
 CS000001877 | Glycoprotein nmb | GPNMB |
 CS000017383 | G protein-coupled receptor 62 | GPR62 |
 CS000008476 | Growth factor receptor bound protein 10 | GRB10 |
 CS000008544 | Growth factor receptor bound protein 7 | GRB7 |
 CS000006655 | G protein-coupled receptor kinase 3 | GRK3 |
 CS000020555 | Granzyme H | GZMH |
 CS000023516 | Hypoxia inducible factor 1 alpha subunit | HIF1A |
 CS000007378 | Heat shock protein family B (small) member 1 | HSPB1 |
 CS000000714 | Interleukin 22 | IL22 |
 CS000008411 | Integrin subunit alpha 11 | ITGA11 |
 CS000005400 | Inositol-trisphosphate 3-kinase A | ITPKA |
 CS000009858 | Arginine demethylase and lysine hydroxylase | JMJD6 |
 CS000020495 | Kinase non-catalytic C-lobe domain containing 1 | KNDC1 |
 CS000009567 | Keratin 18 | KRT18 |
 CS000019220 | Keratin 8 | KRT8 |
 CS000015494 | Limb development membrane protein 1 | LMBR1 |
 CS000008774 | Mitogen-activated protein kinase kinase kinase 5 | MAP3K5 |
 CS000003679 | Mitogen-activated protein kinase 9 | MAPK9 |
 CS000001243 | Myelin basic protein | MBP |
 CS000023152 | Mindbomb E3 ubiquitin protein ligase 1 | MIB1 |
 CS000017005 | Muskelin 1 | MKLN1 |
 CS000014226 | MOB kinase activator 1B | MOB1B |
 CS000012971 | Neuron derived neurotrophic factor | NDNF |
 CS000008885 | Neural precursor cell expressed, developmentally down-regulated 9 | NEDD9 |
 CS000001770 | Neuroepithelial cell transforming 1 | NET1 |
 CS000000790 | NFKB inhibitor like 1 | NFKBIL1 |
 CS000018597 | Neurexin 2 | NRXN2 |
 CS000014447 | PDZ-binding kinase | PBK |
 CS000003989 | Pleckstrin homology domain interacting protein | PHIP |
 CS000000947 | Pleckstrin homology-like domain family A member 3 | PHLDA3 |
 CS000010015 | Proteolipid protein 1 | PLP1 |
 CS000000163 | DNA polymerase kappa | POLK |
 CS000025418 | Peptidylprolyl isomerase A | PPIA |
 CS000008337 | Protein phosphatase, Mg2+/Mn2+-dependent 1L | PPM1L |
 CS000000189 | Protein kinase AMP-activated non-catalytic subunit beta 2 | PRKAB2 |
 CS000019311 | Protein kinase C alpha | PRKCA |
 CS000012528 | Persephin | PSPN |
 CS000009267 | RAB32, member RAS oncogene family | RAB32 |
 CS000004444 | RAB33A, member RAS oncogene family | RAB33A |
 CS000007756 | Raf-1 proto-oncogene, serine/threonine kinase | RAF1 |
 CS000001871 | Rap guanine nucleotide exchange factor 5 | RAPGEF5 |
 CS000015645 | Regulator of cell cycle | RGCC |
 CS000020112 | Ral guanine nucleotide dissociation stimulator-like 2 | RGL2 |
 CS000023359 | Ral guanine nucleotide dissociation stimulator like 3 | RGL3 |
 CS000008982 | Regulator of G-protein signaling 5 | RGS5 |
 CS000009817 | Rho related BTB domain containing 2 | RHOBTB2 |
 CS000011866 | Ras homolog family member C | RHOC |
 CS000000565 | Ras and Rab interactor-like protein | RINL |
 CS000012325 | Receptor interacting serine/threonine kinase 2 | RIPK2 |
 CS000012890 | Sestrin 3 | SESN3 |
 CS000021605 | Secreted frizzled related protein 4 | SFRP4 |
 CS000018595 | Signal-induced proliferation-associated 1 | SIPA1 |
 CS000005505 | SIVA1 apoptosis inducing factor | SIVA1 |
 CS000012858 | Suppressor of cytokine signaling 2 | SOCS2 |
 CS000023280 | Sorbin and SH3 domain containing 2 | SORBS2 |
 CS000006802 | Sortilin related VPS10 domain containing receptor 1 | SORCS1 |
 CS000020596 | Sortilin related VPS10 domain containing receptor 2 | SORCS2 |
 CS000011090 | Secreted phosphoprotein 1 | SPP1 |
 CS000021122 | Sprouty related EVH1 domain containing 2 | SPRED2 |
 CS000003610 | Serine/threonine kinase 32A | STK32A |
 CS000024894 | Serine/threonine kinase 38 like | STK38L |
 CS000024997 | Toll like receptor 6 | TLR6 |
 CS000015148 | Tumor necrosis factor superfamily member 10 | TNFSF10 |
 CS000011024 | Target of myb1 like 1 membrane trafficking protein | TOM1L1 |
 CS000019856 | TNF receptor associated factor 2 | TRAF2 |
 CS000012224 | TNF receptor associated factor 3 | TRAF3 |
 CS000018042 | Tribbles pseudokinase 1 | TRIB1 |
 CS000002912 | Tripartite motif containing 21 | TRIM21 |
 CS000005987 | Tyrosine kinase 2 | TYK2 |
 CS000020993 | TYRO3 protein tyrosine kinase | TYRO3 |
 CS000017504 | unc-5 netrin receptor A | UNC5A |
 CS000002566 | VAMP associated protein B and C | VAPB |
 CS000025210 | Wnt family member 11 | WNT11 |
 CS000014907 | Zinc finger protein 219 | ZNF219 |
 CS000002650 | Doublecortin domain containing 1 |  |
 CS000013923 | Uncharacterized |  |
 CS000014046 | G protein-coupled receptor kinase 5-like |  |
 CS000019987 | Plexin A3 |  |
 CS000025011 | Retinoic acid receptor, alpha |  |