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Fig. 6 | Epigenetics & Chromatin

Fig. 6

From: Reinforcement of repressive marks in the chicken primordial germ cell epigenetic signature: divergence from basal state resetting in mammals

Fig. 6

H3K9me3 at repeated elements in chicken PGCs compared with ESCs. A Overall enrichment for repeated elements (REs) in H3K9me3-immunoprecipitated and input chromatin. Counts of bases belonging to REs are expressed relative to the total base count in sequencing libraries. B Enrichment of CNM repeats in H3K9me3-immunoprecipitated and input chromatin. Counts of CNM repeat containing reads are expressed as a percentage of the total read count in sequencing libraries. C H3K9me3 enrichment for the major categories of REs identified using RepeatMasker. Read counts in IP relative to input chromatin libraries were calculated for each element type prior to grouping by class. DNA transposons, LINE long interspersed nuclear elements, LTR long terminal repeat containing elements, SINE short interspersed nuclear elements

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Epigenetics & Chromatin

ISSN: 1756-8935