Table 2 Infinium Human Methylation 450K BeadChip arrays available in TCGA
From: Promoter hypermethylation of neural-related genes is compatible with stemness in solid cancers
Cancer type | Abbreviation | N normal | N tumor |
|---|---|---|---|
Bladder cancer | BLCA | 21 | 416 |
Breast cancer | BRCA | 96 | 794 |
Cholangiocarcinoma | CHOL | 9 | 36 |
Colon adenocarcinoma | COAD | 38 | 309 |
Esophageal cancer | ESCA | 16 | 186 |
Head and neck cancer | HNCA | 50 | 530 |
Kidney clear cell carcinoma | KIRC | 160 | 323 |
Kidney papillary Cell carcinoma | KIRP | 45 | 276 |
Liver cancer | LIHC | 50 | 380 |
Lung adenocarcinoma | LUAD | 32 | 471 |
Lung squamous cell carcinoma | LUSC | 42 | 370 |
Pancreatic cancer | PAAD | 10 | 185 |
Prostate cancer | PRAD | 50 | 503 |
Rectal cancer | READ | 7 | 99 |
Thyroid cancer | THCA | 56 | 515 |
Endometrioid cancer | UCEC | 46 | 436 |