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Fig. 1 | Epigenetics & Chromatin

Fig. 1

From: The zinc finger protein CLAMP promotes long-range chromatin interactions that mediate dosage compensation of the Drosophila male X-chromosome

Fig. 1

source data provided as Additional file 1: Source Data file). B Pairwise Hi-C replicate concordance scores as measured by GenomeDISCO (source data provided as Additional file 1: Source Data file). C Per chromosome KR balanced matrices for gfp RNAi (top), clamp RNAi (middle), and clamp vs gfp RNAi (bottom). Each chromosome is shown at 50 kb resolution. D The per chromosome distribution of high-confidence Hi-C interactions (source data provided in Additional file 5: Table S3 and Additional file 1: Source Data file). E The distribution of X-chromosome high-confidence Hi-C interactions that involve a CES and matched control (randomized active chromatin regions) (source data provided as Additional file 1: Source Data file)

Experimental QC and Hi-C replicate concordance. A Western blot for gfp and clamp RNAi Hi-C experiments indicating successful knockdown of CLAMP protein (

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Epigenetics & Chromatin

ISSN: 1756-8935