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Fig. 3 | Epigenetics & Chromatin

Fig. 3

From: BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks

Fig. 3

Re-analysis of RNA-seq data. a Overview of BAMscale RNA-seq mode. Coverage resolution is switched to single-base resolution in bins where adjacent base coverages exceed 4 reads. b Comparison of coverage tracks between IGVTools, Deeptools and BAMscale. c Performance comparison of three tools. d Differentially expressed genes between Top1mt wild-type and knock-out mice. e Comparison of unscaled and scaled coverages

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Epigenetics & Chromatin

ISSN: 1756-8935