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Fig. 1 | Epigenetics & Chromatin

Fig. 1

From: Joint inference and alignment of genome structures enables characterization of compartment-independent reorganization across cell types

Fig. 1

a Example of MultiMDS applied to GM12878 and K562 chr21 data sets at 10-kb resolution. b Example of relocalization distance calculations in aligned GM12878 and K562 chr21 structures. Only chr21:22.26–23.26 Mb is shown. Relocalization distance is calculated for the loci 22.61–22.62 Mb (magenta) and 22.31–22.32 Mb (blue). c Pairwise correlations between multiple runs of MultiMDS applied to GM12878 and K562 chr21, measured across a range of similarity weights. Zero weight represents independent inference and alignment

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Epigenetics & Chromatin

ISSN: 1756-8935