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Fig. 2 | Epigenetics & Chromatin

Fig. 2

From: XL-DNase-seq: improved footprinting of dynamic transcription factors

Fig. 2

Total number of detected footprints across the cross-linking conditions. a Total number of FDR 1% putative footprints called by DNase2TF was averaged over five rounds of subsampling. Subsampling of reads was performed to keep the number of uniquely mapped reads the same across conditions for fair comparison (see “Methods”). b Footprint z score comparison across the conditions at CTCF motif sites in open chromatin. See also Additional file 2: Fig. S2

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