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Fig. 5 | Epigenetics & Chromatin

Fig. 5

From: Integration of DNA methylation patterns and genetic variation in human pediatric tissues help inform EWAS design and interpretation

Fig. 5

Overlap and representation of identified CpGs in previously published pediatric EWAS findings. a Venn diagram of CpGs identified as informative, differentially methylated between tissues, or underlying our set of validated cis-mQTL. Scatterplots display three representative CpGs from the pairwise intersections between categories. b Stacked bar plot showing proportion of CpGs of each defined category represented in significant CpGs of various pediatric EWAS publications in BECs or PBMCs (All = all categories; Differential = differentially methylated between tissues; Informative = informative CpG; Inform + Diff = informative and differential; mQTL = CpG associated with mQTL; mQTL + Diff = mQTL CpG and differential; mQTL + Inform = mQTL CpG and informative; None = not in any of the listed categories)

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Epigenetics & Chromatin

ISSN: 1756-8935