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Table 2 ENCODE datasets used for histone modifications and replication timing

From: DNA replication and repair kinetics of Alu, LINE-1 and satellite III genomic repetitive elements

Cell line Dataset Data source [48, 49]
HeLa-S3 Repli-seq data GSM923449
HeLa-S3 H3K4me1 GSM798322
HeLa-S3 H3K4me2 GSM733734
HeLa-S3 H3K4me3 GSM73368
HeLa-S3 H3K36me3 GSM733711
HeLa-S3 H3K79me2 GSM733669
HeLa-S3 H3K9ac GSM733756
HeLa-S3 H3K27ac GSM733684
HeLa-S3 H3K27me3 GSM733696
HeLa-S3 H3K9me3 GSM1003480
GM12878 Repli-seq data GSM923451
GM12878 H3K4me1 GSM733772
GM12878 H3K4me2 GSM733769
GM12878 H3K4me3 GSM733708
GM12878 H3K36me3 GSM733679
GM12878 H3K79me2 GSM733736
GM12878 H3K9ac GSM733677
GM12878 H3K27ac GSM733771
GM12878 H3K27me3 GSM733758
GM12878 H3K9me3 GSM733664
HepG2 Repli-seq data GSM923446
HepG2 H3K4me1 GSM798321
HepG2 H3K4me2 GSM733693
HepG2 H3K4me3 GSM733737
HepG2 H3K36me3 GSM733685
HepG2 H3K79me2 GSM733641
HepG2 H3K9ac GSM733638
HepG2 H3K27ac GSM733743
HepG2 H3K27me3 GSM733754
HepG2 H3K9me3 GSM1003519