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Table 1 Overview of human repetitive and non-B DNA elements

From: DNA replication and repair kinetics of Alu, LINE-1 and satellite III genomic repetitive elements

DNA sequence element Type of sequence Data source [29, 30]
Alu sequence Short interspersed nuclear element RepeatMasker
MIR Short interspersed nuclear element RepeatMasker
LINE1 Long interspersed nuclear element RepeatMasker
LINE2 Long interspersed nuclear element RepeatMasker
MER LTRs/DNA transposons RepeatMasker
AT low complexity repeats   RepeatMasker
GC low complexity repeats   RepeatMasker
Simple sequence repeats (SSRs) Tandem repeats RepeatMasker
G-Quadruplex forming repeats non-B DNA structure RepeatMasker
Z-DNA motif non-B DNA structure Non-B DataBase
Inverted repeats Repetitive DNA element Non-B DataBase
Cruciform motif non-B DNA structure Non-B DataBase
Direct repeats Repetitive DNA element Non-B DataBase
Slipped motif non-B DNA structure Non-B DataBase
Mirror repeats Repetitive DNA element Non-B DataBase
Triplex motif non-B DNA structure Non-B DataBase
A-Phased motif non-B DNA structure Non-B DataBase
Microsatellite Tandem repeats RepeatMasker