Table 2 Average methylation level of CG, CHG, and CHH contexts in four maize RRBS
From: Optimized reduced representation bisulfite sequencing reveals tissue-specific mCHH islands in maize
| Shoot (%) | Tassel (%) | Number of sites | |
|---|---|---|---|
| MseI | |||
| CG | 77.69 | 82.84 | 5,398,944 |
| CHG | 61.39 | 68.08 | 5,590,339 |
| CHH | 1.53 | 1.80 | 24,595,783 |
| CviQI | |||
| CG | 64.76 | 70.75 | 5,689,945 |
| CHG | 53.14 | 61.01 | 5,381,124 |
| CHH | 1.04 | 1.77 | 18,074,911 |