From: Enhancers and silencers: an integrated and simple model for their function
Gene/locus | Association | Type | Reference |
---|---|---|---|
IgH locus | mU element | Enhancer | [6] |
β-globin locus | LCR | Enhancer | |
Kit | -114 kb | Enhancer | [72] |
Arc promoter | eRNA | Enhancer | [28] |
HOXA locus | HOTTIP | Enhancer | [35] |
Prostate cancer cells | Androgen receptor | Enhancer | [20] |
Sox2 | SRR1/2 | Enhancer | [90] |
HO-1 | +12.5 kb | Enhancer | [91] |
Progesterone receptor | agRNA, miRNA | Silencer | |
Androgen receptor | agRNA | Silencer | [37] |
Cyclooxygenase-2 | agRNA | Silencer | [37] |
LDL receptor | agRNA | Silencer | [37] |
Major vault protein | agRNA | Silencer | [37] |
Huntingtin | agRNA | Silencer | [37] |
Various target genes | Polycomb | Silencer | [44] |
INK4-ARF locus | Polycomb | Silencer | [100] |
XOXD locus | HOTAIR | Silencer | [33] |
X chromosome | Xist | Silencer | [42] |
Chicken β-globin locus | 5'HS4 | Insulator | [92] |
ApoB locus | 5' end of gene | Insulator | [93] |
Drosophila HOX locus | Stalled RNAPs | Insulator | [53] |
Mouse Igf2-H19 locus | CTCF | Insulator | [50] |
Dystrophy locus | CTCF | Insulator | [94] |
IL-3 | CTCF | Insulator | [57] |
GMCSF locus | CTCF | Insulator | [57] |
Renin | CTCF | Insulator | [58] |
ETNK2 locus | CTCF | Insulator | [58] |
CFTR locus | CTCF | Insulator | [95] |
c-Myc | CTCF | Insulator | [55] |
Chicken α-globin locus | CTCF | Insulator | [96] |