Figure 5
From: Allele-specific transcriptional elongation regulates monoallelic expression of the IGF2BP1 gene
DNA methylation analysis of the IGF2BP1 CTCF binding region. Analysis of DNA methylation with bisulfite sequencing at the intronic CTCF binding region of the IGF2BP1 gene is shown. (A) The percentage of methylation of CpG sites in gDNA derived from cell lines that express IGF2BP1 from only one allele (GM7016, GM6989) or from both alleles (GM7057) is shown. The CpG residue located within the CTCF binding motif is invariably methylated and is indicated by the thick black bar located adjacent to CpG site 7 (indicated by asterisks). (B) The percentage of methylation at each CpG site of the IGF2BP1 CTCF site in DNA samples recovered from anti-H3K9me3 ChIP. (C) The percentage of methylation at each CpG site of the IGF2BP1 CTCF site in DNA samples recovered from anti-CTCF ChIP experiments. The level of DNA methylation is represented according to the heat map keys located at the bottom of the figure.