From: Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
RE-RNA | CRREW | CRREW class | Enriched biological process | Enriched MSigDB Gene Set |
---|---|---|---|---|
CAMTA2 | No | – | Cellular stress | GOBP positive regulation of cellular biosynthetic process |
Gene regulation | GOBP positive regulation of nucleobase containing compound metabolic process | |||
GOBP positive regulation of RNA metabolic process | ||||
GOBP positive regulation of transcription by RNA polymerase II | ||||
GOCC chromosome | ||||
GOMF chromatin binding | ||||
GOMF transcription coactivator activity | ||||
GOMF transcription regulator activity | ||||
CUL2 | Yes | Chromatin remodeler cofactor | Cellular stress | REACTOME cellular responses to stimuli |
Apoptosis | Graessman apoptosis by doxorubicin dn | |||
GOBP programmed cell death | ||||
DNA damage response to UV exposure | Dacosta UV response via ERCC3 dn | |||
Gene regulation | GOCC transferase complex | |||
Shen SMARCA2 targets up | ||||
PHF10 | Yes | Chromatin remodeler cofactor | Cellular stress | GOBP negative regulation of biosynthetic process |
GOBP positive regulation of cellular biosynthetic process | ||||
Martens tretinoin response dn | ||||
Gene regulation | GOBP negative regulation of nucleobase containing compound metabolic process | |||
GOBP positive regulation of nucleobase containing compound metabolic process | ||||
GOBP positive regulation of RNA metabolic process | ||||
GOBP positive regulation of transcription by RNA polymerase II | ||||
GOCC chromosome | ||||
GOMF histone binding | ||||
GOMF transcription coregulator activity | ||||
GOMF transcription regulator activity | ||||
PSME4 | No | – | Cellular stress | GOBP cellular response to DNA damage stimulus |
GOBP cellular response to stress | ||||
REACTOME cellular responses to stimuli | ||||
Cell cycle | GOBP nucleus organization | |||
REACTOME cell cycle | ||||
REACTOME cell cycle mitotic | ||||
DNA damage response to UV exposure | Dacosta UV response via ERCC3 dn | |||
Gene regulation | GOBP chromatin organization | |||
GOBP chromosome organization | ||||
GOMF histone binding | ||||
REACTOME metabolism of RNA | ||||
REACTOME RNA polymerase II transcription | ||||
Senese HDAC3 targets up | ||||
SMARCC1 | Yes | Chromatin remodeler cofactor | Cellular stress | GOBP cellular response to endogenous stimulus |
GOBP positive regulation of cellular biosynthetic process | ||||
GOBP regulation of catabolic process | ||||
GOBP response to endogenous stimulus | ||||
Martens tretinoin response dn | ||||
Cell cycle | Fischer DREAM targets | |||
Hallmark G2M checkpoint | ||||
DNA damage response to UV exposure | Monnier postradiation tumor escape up | |||
Gene regulation | GOBP chromatin organization | |||
GOBP chromatin binding | ||||
GOBP chromosome organization | ||||
GOBP positive regulation of RNA metabolic process | ||||
GOBP positive regulation of nucleobase containing compound metabolic process | ||||
GOBP positive regulation of transcription by RNA polymerase II | ||||
GOCC chromosome | ||||
GOMF histone binding | ||||
GOMF transcription coactivator activity | ||||
GOMF transcription coregulator activity | ||||
GOMF transcription regulator activity | ||||
GSE17721 CPG vs gardiquimod 4Â h BMDC dn | ||||
Hallmark MYC targets V1 | ||||
Marson bound by FOXP3 stimulated | ||||
Marson bound by FOXP3 unstimulated | ||||
REACTOME chromatin modifying enzymes | ||||
REACTOME RNA polymerase II transcription | ||||
Senese HDAC3 targets up |