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Table 4 Sequences of primers used in plasmid construction and biotinylated DNA probe generation

From: Manipulating chromatin architecture in C. elegans

Primer name

Primer sequence

SJ-BYU-1

AAGCTTATCCCATTCTCTCATCAATTGAGTGGGATGAGGCTATCTCTGCCTCTCTTCTGA

SJ-BYU-2

GCTAGCGTCATCCACAGTGTAATGTAAGATGGTTCAGAGATTCAGAAGAGAGGCAGAGAT

CK-SJ-5

ACTAGCAAGCTTGGAGATCCCTCGAAAATTTC

CK-SJ-6

GTGCTCAAGCTTGGAAATCTCCGGGGAATTTC

CK-SJ-7

ACTAGCGCTAGCGGAGATCCCTCGAAAATTTC

CK-SJ-8

GTGCTCGCTAGCGGAAATCTCCGGGGAATTTC

HindIII601 F

AAGCTTACAGGATGTATATATCTGACACG

HindIII601 R

AAGCTTACTGGAGAATCCCGGTCTGC

NheI601 F

GCTAGCACAGGATGTATATATCTGACACG

NheI601 R

GCTAGCACTGGAGAATCCCGGTCTGC

NheI_5t

/5Phos/CTAGCTTTTTG

NheI_5a

/5Phos/CTAGCAAAAAG

HindIII_5t

/5Phos/AGCTTTTTTTA

HindIII_5a

/5Phos/AGCTTAAAAAA

N_R_polyT

/5Phos/CTAGCAAAAAAAAAAAAAAAAAAAAG

N_F_polyT

/5Phos/CTAGCTTTTTTTTTTTTTTTTTTTTG

H_R_polyT

/5Phos/AGCTTAAAAAAAAAAAAAAAAAAAAA

H_F_polyT

/5Phos/AGCTTTTTTTTTTTTTTTTTTTTTTA

70R_N_pSJ322

GCTAGCAAATTATTGGTTTTTAATGTTTTTTGCTG

70F_N_pSJ322

GCTAGCTATTTCAAAAATAATTTTTCTAGTATAATTC

70R_H_pSJ322

AAGCTTAAATTATTGGTTTTTAATGTTTTTTGCTG

70F_H_pSJ322

AAGCTTTATTTCAAAAATAATTTTTCTAGTATAATTC

0SMJ023

/5Phos/CTAGCTTTTTGTTTTTG

oSMJ024

/5Phos/CTAGCAAAAACAAAAAG

oSMJ118

ATGGAAAAACGCCAGCAACG

oSMJ119_5Biotin

TATGAGGACGGTATACATTCG