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Fig. 5 | Epigenetics & Chromatin

Fig. 5

From: TET-mediated DNA hydroxymethylation is negatively influenced by the PARP-dependent PARylation

Fig. 5

PARP activity, global DNA methylation and hydroxymethylation in niraparib treated NIH3T3 cells and in PARP−/− cells. a PARP activity was evaluated by ELISA-based assay. Results were scaled to control NIH3T3 cells and are shown as mean ± SEM (n = 3). Statistical significance was evaluated by ANOVA (with blocking by sets of samples processed together) followed by a Dunnett test comparing each group to the control group. b Global level of DNA methylation was evaluated by an ELISA-based assay. Based on the absorbance measured for the standards, the calibration curve was approximated via a second-order logarithmic regression equation. The percentage of 5mC in the tested samples was calculated from the calibration curve. Results are presented as mean ± SEM (n = 3). Statistical significance was evaluated by ANOVA (with blocking by sets of samples processed together) followed by a Dunnett test comparing each group to the control group. c Immunocytological detection of 5hmC, with anti-5hmC antibody, by confocal imaging. d Quantification of 5hmC signal in confocal images. Integrated signal density (IntDen) of single nuclei was Log10 transformed and represented by a box-plot and the mean value for each sample was marked (). Statistical significance was evaluated by nested ANOVA followed by the Tukey post hoc test. All groups are significantly different from each other at p*** ≤ 0.001. *p ≤ 0.05, **p ≤ 0.01, n‐number of independent experiments

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