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Table 6 GO Cellular Component terms and genes that were enriched among differentially expressed genes in ventricles from juvenile snapping turtles

From: Developmental programming of DNA methylation and gene expression patterns is associated with extreme cardiovascular tolerance to anoxia in the common snapping turtle

locus_number (in snapping turtle)

gene_name

gene_symbol

Collagen trimer

 CS000004853

Collagen type III alpha 1 chain

COL3A1

 CS000025399

Collagen type IV alpha 6 chain

COL4A6

 CS000009656

Collagen type VIII alpha 1 chain

COL8A1

 CS000002886

Collagen type XV alpha 1 chain

COL15A1

 CS000014058

Collagen, type XVIII, alpha 1

COL18A1

 CS000002530

Collagen type XX alpha 1 chain

COL20A1

 CS000018990

Collagen type XXII alpha 1 chain

COL22A1

 CS000007237

Collectin subfamily member 10

COLEC10

 CS000014966

Ficolin 3

FCN3

z-disc

 CS000009788

Bone morphogenetic protein 10

BMP10

 CS000011960

Crystallin alpha B

CRYAB

 CS000018274

Cysteine and glycine rich protein 1

CSRP1

 CS000002632

Cysteine and glycine rich protein 3

CSRP3

 CS000023885

Formin homology 2 domain containing 3

FHOD3

 CS000007378

Heat shock protein family B (small) member 1

HSPB1

 CS000019220

Keratin 8

KRT8

 CS000005252

Myomesin 3

MYOM3

 CS000000499

Myopalladin

MYPN

 CS000015509

Sodium voltage-gated channel alpha subunit 5

SCN5A

 CS000023280

Sorbin and SH3 domain containing 2

SORBS2

Extracellular space

 CS000008845

Apolipoprotein F

APOF

 CS000009788

Bone morphogenetic protein 10

BMP10

 CS000004917

Bone morphogenetic protein receptor type 2

BMPR2

 CS000004554

Complement C1r

C1R

 CS000021043

Complement C1s

C1S

 CS000023075

CD109 molecule

CD109

 CS000003093

Cadherin 13

CDH13

 CS000003059

Carboxylesterase 2

CES2

 CS000010784

Cholesteryl ester transfer protein

CETP

 CS000014980

Complement factor B

CFB

 CS000008574

2′,3′-Cyclic nucleotide 3′ phosphodiesterase

CNP

 CS000002886

Collagen type XV alpha 1 chain

COL15A1

 CS000014058

Collagen, type XVIII, alpha 1

COL18A1

 CS000002530

Collagen type XX alpha 1 chain

COL20A1

 CS000018990

Collagen type XXII alpha 1 chain

COL22A1

 CS000004853

Collagen type III alpha 1 chain

COL3A1

 CS000025399

Collagen type IV alpha 6 chain

COL4A6

 CS000009656

Collagen type VIII alpha 1 chain

COL8A1

 CS000007237

Collectin subfamily member 10

COLEC10

 CS000005701

Extracellular leucine rich repeat and fibronectin type III domain containing 1

ELFN1

 CS000012011

Coagulation factor III, tissue factor

F3

 CS000003405

Fibronectin 1

FN1

 CS000008168

Glucagon

GCG

 CS000018642

Hyaluronan-binding protein 2

HABP2

 CS000007378

Heat shock protein family B (small) member 1

HSPB1

 CS000000714

Interleukin 22

IL22

 CS000005377

Galectin 1

LGALS1

 CS000024186

Leucine rich repeat containing 3B

LRRC3B

 CS000000330

Matrix metallopeptidase 25

MMP25

 CS000001051

Monooxygenase DBH like 1

MOXD1

 CS000025418

Peptidylprolyl isomerase A

PPIA

 CS000007586

Proline and arginine rich end leucine rich repeat protein

PRELP

 CS000012528

Persephin

PSPN

 CS000006963

Secretogranin II

SCG2

 CS000024555

Stimulator of chondrogenesis 1

SCRG1

 CS000021605

Secreted frizzled related protein 4

SFRP4

 CS000008622

Sclerostin

sost

 CS000011090

Secreted phosphoprotein 1

SPP1

 CS000002388

Suppression of tumorigenicity 14

ST14

 CS000025210

Wnt family member 11

WNT11

 CS000012404

Uncharacterized

 

 CS000021864

PZP, alpha-2-macroglobulin like

 

Extracellular region

 CS000014235

Anthrax toxin receptor 2

ANTXR2

 CS000003440

Apolipoprotein C1

apoc1

 CS000021833

Rho GTPase activating protein 45

ARHGAP45

 CS000009788

Bone morphogenetic protein 10

BMP10

 CS000004554

Complement C1r

C1R

 CS000021043

Complement C1s

C1S

 CS000010941

Coiled-coil domain containing 40

CCDC40

 CS000023075

CD109 molecule

CD109

 CS000003093

Cadherin 13

CDH13

 CS000010784

Cholesteryl ester transfer protein

CETP

 CS000014980

Complement factor B

CFB

 CS000006114

Chordin like 1

CHRDL1

 CS000002886

Collagen type XV alpha 1 chain

COL15A1

 CS000014058

Collagen, type XVIII, alpha 1

COL18A1

 CS000002530

Collagen type XX alpha 1 chain

COL20A1

 CS000018990

Collagen type XXII alpha 1 chain

COL22A1

 CS000004853

Collagen type III alpha 1 chain

COL3A1

 CS000025399

Collagen type IV alpha 6 chain

COL4A6

 CS000009656

Collagen type VIII alpha 1 chain

COL8A1

 CS000007237

Collectin subfamily member 10

COLEC10

 CS000009979

Cysteine rich transmembrane BMP regulator 1

CRIM1

 CS000011191

Deoxyribonuclease 1 like 3

DNASE1L3

 CS000021606

Ependymin related 1

EPDR1

 CS000013674

Eva-1 homolog C

EVA1C

 CS000014966

Ficolin 3

FCN3

 CS000002168

Fibroblast growth factor receptor 3

FGFR3

 CS000003405

Fibronectin 1

FN1

 CS000002902

Gamma-aminobutyric acid type B receptor subunit 1

GABBR1

 CS000008168

Glucagon

GCG

 CS000009498

Glypican 3

GPC3

 CS000018642

Hyaluronan-binding protein 2

HABP2

 CS000000714

Interleukin 22

IL22

 CS000012953

Immunoglobulin superfamily containing leucine-rich repeat

ISLR

 CS000005377

Galectin 1

LGALS1

 CS000012971

Neuron derived neurotrophic factor

NDNF

 CS000021269

Neural EGFL like 1

NELL1

 CS000012602

Neuritin 1

NRN1

 CS000002394

Neurotrimin

NTM

 CS000025418

Peptidylprolyl isomerase A

PPIA

 CS000007586

Proline and arginine rich end leucine rich repeat protein

PRELP

 CS000012962

Protease, serine 12

PRSS12

 CS000012528

Persephin

PSPN

 CS000013172

Sperm flagellar 2

SPEF2

 CS000011090

Secreted phosphoprotein 1

SPP1

 CS000019009

Thrombospondin type 1 domain containing 7A

THSD7A

 CS000015148

Tumor necrosis factor superfamily member 10

TNFSF10

 CS000011540

von Willebrand factor A domain containing 3A

VWA3A

 CS000013624

von Willebrand factor A domain containing 5B1

VWA5B1

 CS000025210

Wnt family member 11

WNT11

 CS000012404

Uncharacterized

 
  1. Gene names and gene symbols are listed for each enriched GO term. GO terms were considered significant when FDR corrected p ≤ 0.05