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Table 3 Genes that displayed significant oxygen concentration by age interactions in ventricles from juvenile snapping turtles exposed to normoxia (N21) or hypoxia (H10) during embryonic development and sampled at 7 months or 9 months of age

From: Developmental programming of DNA methylation and gene expression patterns is associated with extreme cardiovascular tolerance to anoxia in the common snapping turtle

locus_number gene_name gene_symbol
CS000013624 von Willebrand factor A domain containing 5B1 VWA5B1
CS000017075 Adhesion G protein-coupled receptor D2 ADGRD2
CS000002650 Doublecortin domain containing 1  
CS000020386   
CS000005701 Extracellular leucine rich repeat and fibronectin type III domain containing 1 ELFN1
CS000007756 Raf-1 proto-oncogene, serine/threonine kinase RAF1
CS000012404   
CS000011576 Immunity related GTPase cinema  
CS000017702   
CS000017791 Gag-pol precursor polyprotein  
CS000005252 Myomesin 3 MYOM3
CS000013643 Heat shock protein 30C L homeolog  
CS000007769   
CS000000238 Tryptophan hydroxylase 1 TPH1
CS000022856   
CS000011558 Transmembrane channel-like 5 TMC5
CS000020596 Sortilin related VPS10 domain containing receptor 2 SORCS2
CS000004923 CD28 molecule CD28
CS000008982 Regulator of G-protein signaling 5 RGS5
CS000001877 Glycoprotein nmb GPNMB
CS000011960 Crystallin alpha B CRYAB
CS000000625 HEN1 methyltransferase homolog 1 HENMT1
CS000011913 Heat shock protein 30C L homeolog  
CS000021013 Fibrous sheath interacting protein 1 FSIP1
CS000005377 Galectin 1 LGALS1
CS000017153 Guanylate-binding protein 2-like  
CS000000187 Phosphoglycerate dehydrogenase PHGDH
CS000011024 Target of myb1-like 1 membrane trafficking protein TOM1L1
CS000016415 Endogenous retrovirus group V member 2  
CS000011191 Deoxyribonuclease 1 like 3 DNASE1L3
CS000003395 Ankyrin repeat and SOCS box containing 18 ASB18
CS000004493 Spindle assembly abnormal protein 6 homolog  
CS000024997 Toll like receptor 6 TLR6
CS000023735   
CS000001051 Monooxygenase DBH like 1 MOXD1
CS000000229 Potassium voltage-gated channel subfamily J member 11 KCNJ11
CS000001730 Ferredoxin 1 FDX1
CS000005131 Glutaredoxin GLRX
CS000006114 Chordin like 1 CHRDL1
CS000012086 Actin, aortic smooth muscle-like  
CS000003405 Fibronectin 1 FN1
CS000003059 Carboxylesterase 2 CES2
CS000003128 Cytochrome b-245 alpha chain CYBA
CS000000901 Transmembrane protein 159 L homeolog tmem159.L
CS000023152 Mindbomb E3 ubiquitin protein ligase 1 MIB1
CS000017081 Prostaglandin-endoperoxide synthase 1 PTGS1
CS000017005 Muskelin 1 MKLN1
CS000004866 Myosin IB MYO1B
CS000013316 KIAA0368 KIAA0368
CS000001871 Rap guanine nucleotide exchange factor 5 RAPGEF5
CS000015369 Acyl-CoA-binding domain containing 6 ACBD6
CS000019402 Heat shock protein family B (small) member 3 HSPB3
CS000004507 Cathepsin L ctsl
CS000009267 RAB32, member RAS oncogene family RAB32
CS000003646 Ubiquitin conjugating enzyme E2 B UBE2B
CS000023259 Crystallin zeta CRYZ
CS000013749 Pitrilysin metallopeptidase 1 PITRM1
CS000024623 Myosin VC MYO5C
CS000009274 Glycoprotein integral membrane 1 GINM1
CS000008916 Transmembrane protein 214 TMEM214
CS000002191 Endothelin-converting enzyme 2 ECE2
CS000002902 Gamma-aminobutyric acid type B receptor subunit 1 GABBR1
CS000011567 Glycogen synthase 1 GYS1
CS000024960 DExH-box helicase 9 DHX9
CS000023516 Hypoxia inducible factor 1 alpha subunit HIF1A
CS000009882 Acyl-CoA oxidase 1 ACOX1
CS000017504 Unc-5 netrin receptor A UNC5A
CS000005022 DnaJ heat shock protein family (Hsp40) member C11 DNAJC11
CS000003466 tRNA methyltransferase 10A TRMT10A
CS000001723 ATM serine/threonine kinase ATM
CS000007175 Adhesion G protein-coupled receptor L3 ADGRL3
CS000018314 General transcription factor IIIC subunit 2  
CS000003458 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 SMARCAD1
CS000015974 Coiled-coil domain containing 130 CCDC130
CS000009858 Arginine demethylase and lysine hydroxylase JMJD6
CS000025151 Jumonji and AT-rich interaction domain containing 2 JARID2
CS000014359 Peroxisomal biogenesis factor 26 PEX26
CS000004897 Transmembrane protein 237 TMEM237
CS000014907 Zinc finger protein 219 ZNF219
CS000014046 G protein-coupled receptor kinase 5-like  
CS000011309 Zinc finger and SCAN domains 20  
CS000003047 WD repeat domain 88 WDR88
CS000003006 Mucolipin 3 MCOLN3
CS000008630   
CS000007667 FXYD domain containing ion transport regulator 3  
CS000003008 Mucolipin 2 MCOLN2
CS000019541 Chromosome 21 orf 58  
CS000009617 Transmembrane protease, serine 7 TMPRSS7
CS000019987 Plexin A3  
CS000020555 Granzyme H GZMH
CS000009788 Bone morphogenetic protein 10 BMP10
CS000011540 von Willebrand factor A domain containing 3A VWA3A
CS000021466   
CS000015152   
CS000008845 Apolipoprotein F APOF
CS000023912   
CS000020445 UPF0061 protein xcc-b100,1894-like  
  1. The transcriptome was analyzed via RNA-Seq. Differences in gene expression were considered significant when results from DESeq2 and ANOVA were concordant