Fig. 2
From: Evaluation of whole-genome DNA methylation sequencing library preparation protocols
Library quality metrics for each protocol for Sample A. A The percentage of optimally, sub-optimally, and not aligned read fragments for each protocol. Note, read fragments treat reads 1 and 2 as separate entities, as it is possible that one read in the pair is mapped, while the other is not. Additional file 1: Figure S2 shows the number of read fragments shown on each bar. B Insert size distribution. C Duplicate rate for reads with MAPQ \(\ge 40\). D The library complexity, which is a function of the duplicate rate. Metrics for Sample B are shown in Additional file 1: Figure S3