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Ma et al. (reanalysed)
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Data from Ma et al. [22] reanalysed using our pipeline
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Ramani et al. (reanalysed)
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Data from Ramani et al. [21] reanalysed using our pipeline
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Protocol Ma et al.
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Reproduction of the protocol from [22] in our laboratory
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Protocol Ma et al. new blunt
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Modification of the protocol from [22]. We changed the blunt-adapter sequences to prevent the formation of adapter multimers
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Protocol Ma et al. long linker
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Modification of the protocol from [22]. We abolished the two-step ligation procedure. We used the long linker derived from the BAT-Hi-C protocol instead
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Protocol Ramani et al
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Reproduction of the protocol from [21] in our lab
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Protocol Ramani et al. long linker
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Modification of the protocol from [21]. We abolished the two-step ligation procedure and used the long linker derived from the BAT-Hi-C protocol instead
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Protocol Ramani et al. biotin fill-in
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Modification of the protocol from [21]. We abolished the two-step ligation procedure. End-labelling with biotinylated dCTP nucleotides was performed during the end-repair step following DNase treatment
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