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Table 1 The top 20 most significant differentially methylated genes with a log2FC > 1.2 at the 4-h time point, ordered by magnitude of log2-fold change

From: Genome-wide impact of hydrogen peroxide on maintenance DNA methylation in replicating cells

Probe ID log2FC (4 h) Adj p-val (4 h) log2FC (72 h) Chromosome Location Gene
cg21150892 2.94 0.04 0.27 1 183,846,009 RGL1
cg26890348 2.48 0.03 0.87 13 52,637,074  
cg24024260 − 2.29 0.01 − 0.40 2 182,174,340 LOC101927156
cg05047191 − 2.23 0.04 − 0.33 12 15,304,108 RERG
cg00192946 − 2.19 0.01 − 0.95 X 32,430,274 DMD
cg21426441 − 2.19 0.04 − 0.77 X 17,260,259  
cg14954143 − 2.13 0.02 − 0.79 3 162,071,211  
cg02187176 2.1 0.04 0.61 13 96,367,153 DNAJC3
cg23727674 − 2.09 0.03 − 0.30 2 148,602,993 ACVR2A
cg25969765 − 2.07 0.03 − 0.80 18 58,350,853  
cg11372135 − 2.05 0.01 − 0.54 10 18,629,284 CACNB2
ch.X.16400295F − 2.04 0.02 − 0.76 X 16,490,374  
cg03012782 − 1.87 0.03 − 1.08 3 112,250,543  
cg06780892 − 1.87 0.04 − 0.77 7 20,638,177  
cg15074165 − 1.85 0.03 − 1.00 X 71,792,745 HDAC8
cg09333215 − 1.84 0.01 − 0.17 1 88,475,866  
cg01492091 − 1.81 0.02 − 0.91 7 31,460,998  
cg08892255 − 1.8 0.03 − 1.02 20 21,928,217  
cg07042371 − 1.77 0.02 − 0.71 5 54,468,233 MIR449C
cg01769501 − 1.77 0.04 − 0.67 4 76,912,251 SDAD1
  1. log2FC, log2-fold change of M values
  2. Adj.p-val, adjusted p-value