Skip to main content
Fig. 3 | Epigenetics & Chromatin

Fig. 3

From: Genome-wide occupancy reveals the localization of H1T2 (H1fnt) to repeat regions and a subset of transcriptionally active chromatin domains in rat spermatids

Fig. 3Fig. 3

Genome-wide analysis of H1T2 in rat spermatid genome using antibody against C terminal domain. a Schematic representation of the protocol used for ChIP-sequencing analysis. b Chromosome-wise enrichment of H1T2 ChIP peaks in rat spermatid genome. c Number of peaks distributed across different rat chromosomes (x-axis), where y-axis represents the number of peaks. Box plot representing the H1T2-associated average peak length (y-axis) across different chromosomes (x-axis). d Pie chart distribution of H1T2 peaks for various genomic features in rat spermatids. The peaks are distributed in among intergenic, intron, promoter, exon, TTS, 5′UTR, 3′UTR regions. I, bar diagram of number of occurrences of peaks across repeat elements. e Bar diagram showing the number of occurrences of peaks across different classes of repeat elements. f Bar diagram showing the number of occurrences of peaks across different subclasses of LINE-1 repeat elements. g Motif identification by MEME. The figure represents the details of the three most significant motifs identified from the overlapping peak summits (H1T2 ChIP peaks)

Back to article page

Epigenetics & Chromatin

ISSN: 1756-8935