Skip to main content

Table 1 Motifs and enriched transcription factors

From: Chromatin accessibility dynamics of Chlamydia-infected epithelial cells

Time Motif p value Target sequences with Motif (%) Background sequences with Motif (%) Transcription factor
1 1e−13 10.53 3.84 IRF3*
24 1e−12 17.45 9.78 Homeobox*
48 1e−28 7.67 1.82 Sp1(Zf)
1e−22 6.30 1.58 KLF9(Zf)
1e−21 7.58 2.40 KLF3(Zf)
1e−15 32.58 23.46 MEF2C*
1e−13 9.81 4.90 KLF6(Zf)
1e−10 6.30 2.87 KLF10(Zf)
1e−7 11.06 7.18 KLF5(Zf)
1e−7 10.45 6.71 NFYB
1e−6 5.37 2.87 E2F3
  1. Target sequences are significant differential peaks and background sequences are randomly selected throughout the genome to determine significance. A star (*) denotes a de novo motif where various sources were used to annotate the corresponding transcription factor