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Table 1 Motifs and enriched transcription factors

From: Chromatin accessibility dynamics of Chlamydia-infected epithelial cells

Time

Motif

p value

Target sequences with Motif (%)

Background sequences with Motif (%)

Transcription factor

1

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1e−13

10.53

3.84

IRF3*

24

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1e−12

17.45

9.78

Homeobox*

48

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1e−28

7.67

1.82

Sp1(Zf)

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1e−22

6.30

1.58

KLF9(Zf)

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1e−21

7.58

2.40

KLF3(Zf)

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1e−15

32.58

23.46

MEF2C*

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1e−13

9.81

4.90

KLF6(Zf)

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1e−10

6.30

2.87

KLF10(Zf)

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1e−7

11.06

7.18

KLF5(Zf)

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1e−7

10.45

6.71

NFYB

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1e−6

5.37

2.87

E2F3

  1. Target sequences are significant differential peaks and background sequences are randomly selected throughout the genome to determine significance. A star (*) denotes a de novo motif where various sources were used to annotate the corresponding transcription factor