Fig. 3

Correlations between histones and their modifications and transcription. Log2 (ChIP/input) plotted from 2500 bp upstream (-2500) to 2500 bp downstream (2500) of the transcriptional start (TSS) and stop (TES) sites for all 7671 schizont-stage transcripts assembled by Cufflinks ranked in descending order by transcript abundance (fpkm). The Spearman correlation value (r) for the upstream and downstream enrichment of each histone or histone modification is indicated below the plots