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Table 2 Genomic clusters of miRNAs having strong expression correlations

From: A comprehensive overview of bull sperm-borne small non-coding RNAs and their diversity across breeds

Cluster number Mean correlation Clustered miRNA putatively co-expressed Co-expressed in humans [45]
1 0.75 bta-mir-379 ~ bta-mir-411a ~ bta-mir-299 ~ bta-mir-380 ~ bta-mir-411b ~ bta-mir-323 ~ bta-mir-329b ~ bta-mir-543 ~ bta-mir-495 ~ bta-mir-154c  
2 0.72 bta-mir-532 ~ bta-mir-502a-1 ~ bta-mir-502a-2 ~ bta-mir-502b ~ bta-mir-500 ~ bta-mir-660 ~ bta-mir-502a-1  
3 0.80 bta-mir-431 ~ bta-mir-127 ~ bta-mir-432 ~ bta-mir-136  
4 0.72 bta-mir-450b ~ bta-mir-450a-1 ~ bta-mir-450a-2 Yes
5 0.91 bta-mir-17 ~ bta-mir-18a ~ bta-mir-19a ~ bta-mir-20a ~ bta-mir-19b Yes
6 0.60 bta-mir-363 ~ bta-mir-19b-2 ~ bta-mir-20b ~ bta-mir-18b ~ bta-mir-106a Yes
7 0.89 bta-mir-302b ~ bta-mir-302a ~ bta-mir-302d Yes
8 0.64 bta-mir-2443 ~ bta-let-7b Yes
10 0.65 bta-mir-10174 ~ bta-mir-27b ~ bta-mir-24-1  
14 0.74 bta-mir-429 ~ bta-mir-200a ~ bta-mir-200b Yes
15 0.75 bta-mir-99b ~ bta-let-7e ~ bta-mir-125a Yes
16 0.76 bta-mir-449c ~ bta-mir-449b ~ bta-mir-449a  
18 0.85 bta-mir-93 ~ bta-mir-25 Yes
21 0.76 bta-mir-182 ~ bta-mir-96 ~ bta-mir-183 Yes
22 0.68 bta-mir-24-2 ~ bta-mir-27a Yes
23 0.75 bta-let-7a-1 ~ bta-let-7f-1 ~ bta-let-7d  
24 0.91 bta-mir-3431 ~ bta-mir-224  
25 0.67 bta-mir-105a ~ bta-mir-767 ~ bta-mir-105b  
29 0.65 bta-mir-16b ~ bta-mir-15b Yes
30 0.70 bta-mir-181b-2 ~ bta-mir-181a-2 ~ bta-mir-181a-2 ~ bta-mir-181b-2 Yes
34 0.74 bta-mir-16a ~ bta-mir-15a Yes
41 0.89 bta-mir-34b ~ bta-mir-34c  
47 0.75 bta-mir-29b-2 ~ bta-mir-29c Yes
49 0.70 bta-mir-181b-1 ~ bta-mir-181a-1  
56 0.80 bta-mir-132 ~ bta-mir-212  
57 0.60 bta-mir-195 ~ bta-mir-497 Yes
61 0.61 bta-mir-2904-1 ~ bta-mir-2887-1  
70 0.64 bta-mir-7857-1 ~ bta-mir-7857-2  
72 0.55 bta-mir-1-2 ~ bta-mir-133a-2  
80 0.68 bta-mir-29a ~ bta-mir-29b-1 Yes
83 0.73 bta-mir-141 ~ bta-mir-200c No
91 0.50 bta-mir-374b ~ bta-mir-421  
93 0.91 bta-mir-222 ~ bta-mir-221 No
111 0.65 bta-chr7_62503 ~ bta-chr7_62509  
118 0.89 bta-chr9_69352 ~ bta-chr9_69353  
125 0.78 bta-chr11_8402 ~ bta-chr11_8403  
140 0.65 bta-chr14_15810 ~ bta-chr14_15827  
145 0.99 bta-chr16_21540 ~ bta-chr16_21541  
152 0.65 bta-chr17_25055 ~ bta-chr17_25086  
169 0.51 bta-mir-6522 ~ bta-chr21_37502  
170 0.72 bta-mir-1185 ~ bta-mir-3956 ~ bta-mir-381 ~ bta-mir-487b ~ bta-mir-411c ~ bta-mir-487a ~ bta-mir-382 ~ bta-mir-134 ~ bta-mir-154a ~ bta-mir-154b ~ bta-mir-409a ~ bta-mir-412 ~ bta-mir-369 ~ bta-mir-410 ~ bta-mir-323b ~ bta-mir-656  
183 0.78 bta-chr23_40757 ~ bta-chr23_42270  
211 0.78 bta-mir-6526-3 ~ bta-chrX_70042 ~ bta-chrX_70050 ~ bta-chrX_70048 ~ bta-chrX_70052 ~ bta-chrX_70054  
  1. Additional file 3: Tables S8 and S10 for detailed information. Empty cells correspond to none observed cluster in human article