Table 2 Genomic clusters of miRNAs having strong expression correlations
From: A comprehensive overview of bull sperm-borne small non-coding RNAs and their diversity across breeds
Cluster number | Mean correlation | Clustered miRNA putatively co-expressed | Co-expressed in humans [45] |
|---|---|---|---|
1 | 0.75 | bta-mir-379 ~ bta-mir-411a ~ bta-mir-299 ~ bta-mir-380 ~ bta-mir-411b ~ bta-mir-323 ~ bta-mir-329b ~ bta-mir-543 ~ bta-mir-495 ~ bta-mir-154c |  |
2 | 0.72 | bta-mir-532 ~ bta-mir-502a-1 ~ bta-mir-502a-2 ~ bta-mir-502b ~ bta-mir-500 ~ bta-mir-660 ~ bta-mir-502a-1 |  |
3 | 0.80 | bta-mir-431 ~ bta-mir-127 ~ bta-mir-432 ~ bta-mir-136 |  |
4 | 0.72 | bta-mir-450b ~ bta-mir-450a-1 ~ bta-mir-450a-2 | Yes |
5 | 0.91 | bta-mir-17 ~ bta-mir-18a ~ bta-mir-19a ~ bta-mir-20a ~ bta-mir-19b | Yes |
6 | 0.60 | bta-mir-363 ~ bta-mir-19b-2 ~ bta-mir-20b ~ bta-mir-18b ~ bta-mir-106a | Yes |
7 | 0.89 | bta-mir-302b ~ bta-mir-302a ~ bta-mir-302d | Yes |
8 | 0.64 | bta-mir-2443 ~ bta-let-7b | Yes |
10 | 0.65 | bta-mir-10174 ~ bta-mir-27b ~ bta-mir-24-1 |  |
14 | 0.74 | bta-mir-429 ~ bta-mir-200a ~ bta-mir-200b | Yes |
15 | 0.75 | bta-mir-99b ~ bta-let-7e ~ bta-mir-125a | Yes |
16 | 0.76 | bta-mir-449c ~ bta-mir-449b ~ bta-mir-449a |  |
18 | 0.85 | bta-mir-93 ~ bta-mir-25 | Yes |
21 | 0.76 | bta-mir-182 ~ bta-mir-96 ~ bta-mir-183 | Yes |
22 | 0.68 | bta-mir-24-2 ~ bta-mir-27a | Yes |
23 | 0.75 | bta-let-7a-1 ~ bta-let-7f-1 ~ bta-let-7d |  |
24 | 0.91 | bta-mir-3431 ~ bta-mir-224 |  |
25 | 0.67 | bta-mir-105a ~ bta-mir-767 ~ bta-mir-105b |  |
29 | 0.65 | bta-mir-16b ~ bta-mir-15b | Yes |
30 | 0.70 | bta-mir-181b-2 ~ bta-mir-181a-2 ~ bta-mir-181a-2 ~ bta-mir-181b-2 | Yes |
34 | 0.74 | bta-mir-16a ~ bta-mir-15a | Yes |
41 | 0.89 | bta-mir-34b ~ bta-mir-34c |  |
47 | 0.75 | bta-mir-29b-2 ~ bta-mir-29c | Yes |
49 | 0.70 | bta-mir-181b-1 ~ bta-mir-181a-1 |  |
56 | 0.80 | bta-mir-132 ~ bta-mir-212 |  |
57 | 0.60 | bta-mir-195 ~ bta-mir-497 | Yes |
61 | 0.61 | bta-mir-2904-1 ~ bta-mir-2887-1 |  |
70 | 0.64 | bta-mir-7857-1 ~ bta-mir-7857-2 |  |
72 | 0.55 | bta-mir-1-2 ~ bta-mir-133a-2 |  |
80 | 0.68 | bta-mir-29a ~ bta-mir-29b-1 | Yes |
83 | 0.73 | bta-mir-141 ~ bta-mir-200c | No |
91 | 0.50 | bta-mir-374b ~ bta-mir-421 |  |
93 | 0.91 | bta-mir-222 ~ bta-mir-221 | No |
111 | 0.65 | bta-chr7_62503 ~ bta-chr7_62509 |  |
118 | 0.89 | bta-chr9_69352 ~ bta-chr9_69353 |  |
125 | 0.78 | bta-chr11_8402 ~ bta-chr11_8403 |  |
140 | 0.65 | bta-chr14_15810 ~ bta-chr14_15827 |  |
145 | 0.99 | bta-chr16_21540 ~ bta-chr16_21541 |  |
152 | 0.65 | bta-chr17_25055 ~ bta-chr17_25086 |  |
169 | 0.51 | bta-mir-6522 ~ bta-chr21_37502 |  |
170 | 0.72 | bta-mir-1185 ~ bta-mir-3956 ~ bta-mir-381 ~ bta-mir-487b ~ bta-mir-411c ~ bta-mir-487a ~ bta-mir-382 ~ bta-mir-134 ~ bta-mir-154a ~ bta-mir-154b ~ bta-mir-409a ~ bta-mir-412 ~ bta-mir-369 ~ bta-mir-410 ~ bta-mir-323b ~ bta-mir-656 |  |
183 | 0.78 | bta-chr23_40757 ~ bta-chr23_42270 |  |
211 | 0.78 | bta-mir-6526-3 ~ bta-chrX_70042 ~ bta-chrX_70050 ~ bta-chrX_70048 ~ bta-chrX_70052 ~ bta-chrX_70054 |  |