Skip to main content

Table 6 Comparison of MethylToSNP calls and gap hunting calls

From: MethylToSNP: identifying SNPs in Illumina DNA methylation array data

Data set

MethylToSNP predictions

Gap hunting 3-groups predictions

% Overlap in MethylToSNP with 3-groups predictions (%)a

% Overlap in MethylToSNP including all gap hunting groups (%)b

27K YRI and CEU

371

8486

47

100

27K CEU

283

8416

44

100

27K YRI

37

3409

73

97

  1. YRI Yoruba in Ibadan, Nigeria population, CEU CEU HapMap
  2. aFeature results found in gap hunting 3-group results
  3. bFeature results found in any of 9 gap hunting groups
Back to article page

Epigenetics & Chromatin

ISSN: 1756-8935