MethylToSNP: identifying SNPs in Illumina DNA methylation array data

Table 4 Sequence data verifies the presence of a SNP identified using MethylToSNP

Subject	Methylation beta-value at cg00117311	Putative alleles	Allele frequencies at rs78210031
KB1	0.458	CT	0.5 C/0.5 T
TK1	0.542	CT	0.5 C/0.5 T
NB1	0.954	CC	C
MD8	0.949	CC	C

Sequence data were obtained from the Penn State Genome Browser for four KhoeSan samples

ISSN: 1756-8935