Table 1 Variants predicted by applying MethylToSNP to the YRI and CEU HapMap methylation datasets

Set

SNP predictions in dataset (#)

Overlap with dbSNP 142 (#)

Overlap with dbSNP 146 (#)

Potential novel SNPs^a (#)

Total array sites removed by dbSNP 142 filtering^b,c (#)

Total array sites removed by dbSNP 146 filtering^b,c (#)

Median reliability scores of predicted SNPs

# novel SNPs with reliability scores ≥ 0.5