Table 1 Localisation of large AMRs
AMR genomic position | No. CpGs | AMR width (bps) | Genes |
|---|---|---|---|
chr1:2112321–2234147 | 217 | 121,827 | PRKCZ;SKI;FAAP20 |
chr1:16624194–16728492 | 362 | 104,299 | FAM231A;MIR3675;RNVU1-18 |
chr5:140786373–140843584 | 347 | 57,212 | PCDHA2;PCDHA3;PCDHA4;PCDHA5;PCDHA6;PCDHA7;PCDHA8;PCDHA9;PCDHA1 |
chr5:140848544–140927477 | 263 | 78,934 | PCDHA10;PCDHA11;PCDHA12;PCDHA13;PCDHAC1;PCDHA9;PCDHA1;PCDHA2;PCDHA3;PCDHA4;PCDHA5;PCDHA6;PCDHA7;PCDHA8 |
chr5:141121778–141208851 | 221 | 87,074 | PCDHB4;PCDHB5;PCDHB6;PCDHB7;PCDHB8;PCDHB16;PCDHB9;PCDHB10;PCDHB11;PCDHB12 |
chr5:141321015–141390082 | 592 | 69,068 | PCDHGA1;PCDHGA2;PCDHGA3;PCDHGB1;PCDHGA4;PCDHGB2;PCDHGA5;PCDHGB3;PCDHGA6;PCDHGA7;PCDHGB4;PCDHGA8;TAF7 |
chr5:141392580–141478530 | 615 | 85,951 | PCDHGA8;PCDHGB5;PCDHGA9;PCDHGB6;PCDHGA10;PCDHGB7;PCDHGA11;PCDHGA12;PCDHGC3;PCDHGA1;PCDHGA2;PCDHGA3;PCDHGB1;PCDHGA4;PCDHGB2;PCDHGA5;PCDHGB3;PCDHGA6;PCDHGA7;PCDHGB4 |
chr6:32073900–32155177 | 216 | 81,278 | PPT2;PPT2-EGFL8;TNXB;ATF6B;FKBPL;PRRT1;LOC100507547 |
chr7:27098296–27174773 | 386 | 76,478 | HOTAIRM1;HOXA-AS2;HOXA-AS3;HOXA10-AS;HOXA2;HOXA3;HOXA4;HOXA5;HOXA6;HOXA7;HOXA9;MIR196B;HOXA10;HOXA1;HOXA10-HOXA9 |
chr21:8433975–8438909 | 293 | 4935 | LOC100861532;LOC100008587;LOC100008589 |
chr21:8440273–8452215 | 204 | 11,943 | LOC100008589 |