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Table 1 Abundance of B6(CAST7) and C57BL/6J polymorphisms identified within select imprinted genes

From: Preconception paternal alcohol exposure exerts sex-specific effects on offspring growth and long-term metabolic programming

Gene

SNP location

C57BL/6J

Control 1

Control 2

Control 3

Alcohol 1

Alcohol 2

Alcohol 3

Ascl2

chr7:142,968,971

G

ND

ND

ND

ND

ND

ND

Cdkn1c

chr7:143,460,109

A

A/6

A/6

A/7

A/10

A/3

A/10

Dcn

No SNP found

 

ND

ND

ND

ND

ND

ND

Dlk1

chr12:109,460,379

A

ND

ND

A/1

ND

ND

ND

Gatm

chr2:122,594,926

C

ND

ND

ND

ND

ND

ND

Gnas

No SNP found

 

ND

ND

ND

ND

ND

ND

Grb10

chr11:11,954,907

A

A/1

ND

ND

ND

ND

ND

Gtl2

chr12:109,545,837

A

A/1

A/1

ND

ND

ND

ND

H19

chr7:142,577,095

T

ND

ND

T/1

T/1

T/1 C/1

ND

Igf2 (1)

chr7:142,652,037

G

ND

ND

ND

ND

ND

ND

Igf2 (2)

chr7:142,652,936

C

ND

ND

ND

ND

G/2

ND

Igf2r

chr17:12,682,709

C

C/64

C/116

C/171

C/126

C/67

C/87

Mest

chr6:30,747,382

A

A/2

ND

ND

ND

ND

A/1

Ndn

chr7:62,348,457

T

C/2

C/1

C/1

ND

ND

ND

Peg3

chr7:6,706,217

G

T/4

T/12

T/5

T/2

T/8

T/14

Sgce

chr6:4,717,926

T

T/5

T/4

T/1

T/3

ND

T/4

Slc38a4

chr15:96,995,974

C

C/89 A/1

C/78 A/1

C/26

C/117 A/1

C/74 A/1

C/72

Snrpn

chr7:59,983,415

T

T/49

T/76

T/120

T/94

T/48

T/72

Ube3a

chr7:59,228,878

T

T/7 C/5

T/8 C/8

T/3 C/5

T/16 C/10

T/7 C/9

T/6 C/3

Zac1

chr10:13,128,934

G

G/1

G/5

G/3

G/3

ND

G/1

Zim1

chr7:6,675,637

A

ND

ND

ND

ND

ND

ND

  1. The abundance of B6(CAST7) and C57BL/6J polymorphisms within the RNA sequencing profiles of the adult liver were compared between the offspring of males exposed to the two preconception treatments