Table 1 Number of genes expressed in repressive TAD classes
Domains | # Genes | # Expressed in Kc cells | # Expressed in S2 cells | # Expressed in female salivary glands | # Expressed in male salivary glands | |||||
|---|---|---|---|---|---|---|---|---|---|---|
X | Auto | X | Auto | X | Auto | X | Auto | X | Auto | |
LAD | 590 | 2600 | 113 (8.16)a | 350 (9.74) | 126 (9.54) | 382 (12.71) | 110 (5.29) | 507 (4.93) | 110 (5.25) | 503 (4.66) |
Null | 888 | 5006 | 352 (15.82) | 1633 (16.17) | 346 (15.43) | 1593 (17.89) | 278 (6.03) | 1465 (5.78) | 276 (6.14) | 1460 (5.74) |
Black | 463 | 2887 | 26 (3.06) | 145 (2.75) | 32 (5.08) | 155 (3.85) | 52 (3.06) | 369 (3.77) | 52 (3.13) | 372 (3.61) |
Repressive TADs (overlap) | 285 | 1438 | 16 (5.99) | 41 (2.22) | 17 (10.22) | 47 (2.09) | 30 (2.80) | 165 (3.64) | 31 (2.84) | 165 (3.53) |
Non-repressive TADs (overlap) | 621 | 3411 | 545 (24.75) | 2725 (24.22) | 535 (22.78) | 2623 (25.12) | 376 (7.34) | 1863 (7.26) | 377 (7.32) | 1865 (7.34) |