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TableĀ 1 Number of genes expressed in repressive TAD classes

From: Non-canonical Drosophila X chromosome dosage compensation and repressive topologically associated domains

Domains # Genes # Expressed in Kc cells # Expressed in S2 cells # Expressed in female salivary glands # Expressed in male salivary glands
X Auto X Auto X Auto X Auto X Auto
LAD 590 2600 113
(8.16)a
350
(9.74)
126
(9.54)
382
(12.71)
110
(5.29)
507
(4.93)
110
(5.25)
503
(4.66)
Null 888 5006 352
(15.82)
1633
(16.17)
346
(15.43)
1593
(17.89)
278
(6.03)
1465
(5.78)
276
(6.14)
1460
(5.74)
Black 463 2887 26
(3.06)
145
(2.75)
32
(5.08)
155
(3.85)
52
(3.06)
369
(3.77)
52
(3.13)
372
(3.61)
Repressive TADs
(overlap)
285 1438 16
(5.99)
41
(2.22)
17
(10.22)
47
(2.09)
30
(2.80)
165
(3.64)
31
(2.84)
165
(3.53)
Non-repressive TADs
(overlap)
621 3411 545
(24.75)
2725
(24.22)
535
(22.78)
2623
(25.12)
376
(7.34)
1863
(7.26)
377
(7.32)
1865
(7.34)
  1. aMedian gene expression levels in FPKMs (Kc and S2 cells) and normalized intensity (salivary glands)