Table 1 AP–MS data for Snf5-FZZ and Saf5-FZZ uncover predicted and novel members of a Tetrahymena SWI/SNF complex
TTHERM | Gene name | Spectral count sum Snf5 (BAIT) | Spectral count sum Saf5 (BAIT) | SWI/SNF yeast ortholog | SWI/SNF human ortholog | Notes |
|---|---|---|---|---|---|---|
TTHERM_00584840 | SWI3 | 308 | 835 | Swi3 | BAF170/SMARCC2 | – |
TTHERM_01245640 | BRG1 | 264 | 384 | Snf2 | BRM/SMARCA2 | SNF2 catalytic subunit |
TTHERM_00243900 | SWI1 | 140 | 171 | Swi1 | BAF250A/ARID1A | – |
TTHERM_00304150 | SNF5 | 133 | 72 | Snf5 | BAF47/SMARCB1 | – |
TTHERM_00925560 | SNF12 | 94 | 137 | Snf12 | SMARCD2 | – |
TTHERM_00092790 | SAF1 | 85 | 78 | – | – | Transmembrane protein, putative |
TTHERM_00346460 | SAF2 | 136 | 97 | – | – | Hypothetical protein—13% glutamine |
TTHERM_00129650 | SAF3 | 79 | 40 | – | – | Hypothetical protein—26% glutamine |
TTHERM_00637690 | SAF4 | 32 | 84 | – | – | Hypothetical protein—31% glutamine |
TTHERM_00241840 | SAF5 | 64 | 56 | – | BAF45a | PHD finger-containing protein |
TTHERM_00729230 | IBD1 | 48 | 107 | – | – | Bromodomain-containing protein |
TTHERM_00006320 | Tetrin A | 33 | – | – | – | – |