From: Systematic quantitative analysis of H2A and H2B variants by targeted proteomics
Peptide N° | Protein | Peptide sequence | ESPP score | Heavy peptide identified | Light peptide identified | Identified in our discovery analyses | Recorded in PeptideAtlas |
---|---|---|---|---|---|---|---|
1 | Canonical H2A, H2A.J, H2A.X, H2AZ.1, H2AZ.2, TS H2A.1 | AGLQFPVGR | 0.739 | Yes | Yes | Yes | PAp00032266 |
2 | Canonical H2A, H2A.J, TS H2A.1 | VTIAQGGVLPNIQAVLLPKa | 0.224 | Yes | Yes | PAp00008634 | |
3 | H2A.X | ASQASQEY | 0.278 | No | No | Yes | PAp00852754 |
4 | H2AZ.1, H2AZ.2 | GDEELDSLIK | 0.519 | Yes | Yes | Yes | PAp00067999 |
5 | H2AZ.1, H2AZ.2 | ATIAGGGVIPHIHK | 0.522 | Yes | Yes | Yes | PAp00032640 |
6 | Macro-H2A.1, Macro-H2A.2, Macro-H2A.3 | AGVIFPVGR | 0.575 | Yes | Yes | Yes | PAp00413759 |
7 | Macro-H2A.1, Macro-H2A.2 | HILLAVANDEELNQLLK | 0.222 | Yes | Yes | Yes | PAp00069466 |
8 | Macro-H2A.1 | LEAIITPPPAK | 0.713 | Yes | Yes | Yes | PAp00429995 |
9 | Macro-H2A.1 | AASADSTTEGTPTDGFTVLSTK | 0.517 | Yes | Yes | No | PAp00380945 |
10 | Macro-H2A.1 | NGPLEVAGAAISAGHGLPAK | 0.723 | Yes | Yes | Yes | PAp00389241 |
11 | Macro-H2A.1 | SIAFPSIGSGR | 0.796 | Yes | Yes | Yes | PAp00077504 |
12 | Macro-H2A.2, Macro-H2A.3 | GVTIASGGVLPR | 0.866 | Yes | Yes | Yes | PAp00519811 |
13 | Macro-H2A.2 | SETILSPPPEK | 0.580 | Yes | No | Yes | |
14 | Macro-H2A.2 | EGTSNSTSEDGPGDGFTILSSK | 0.499 | No | No | Yes | |
15 | Macro-H2A.2 | SVAFPPFPSGR | 0.578 | Yes | Yes | Yes | |
16 | Macro-H2A.3 | NCLSAAEIR | 0.726 | Yes | No | No | |
17 | Macro-H2A.3 | SPVAETASPGRPGDPQGHLGSLR | 0.664 | Yes | No | No | |
18 | Macro-H2A.3 | AGDGQTGHQVALSGSGGEGGSA | 0.504 | No | No | No | |
19 | TS H2A.1 | QGNYAQR | 0.089 | Yes | No | No | |
20 | H2A.L.1-H2al1a | GELPFSLVDR | 0.821 | Yes | Yes | Yes | |
21 | H2A.L.1-H2al1a, H2al1e, H2al1k, H2al1o | IAPEDVR | 0.299 | No | No | ||
22 | H2A.L.1-H2al1b, H2al1e, H2al1k, H2al1m, H2al1n | GELPLSLVDR | 0.814 | Yes | Yes | Yes | |
23 | H2A.L.1-H2al1b | IAPEDVHLVVQNNEQLR | 0.301 | Yes | No | Yes | |
24 | H2A.L.1-H2al1a, H2al1e, H2al1k, H2al1m | LVVQNNEQLR | 0.596 | Yes | Yes | Yes | |
25 | H2A.L.1-H2al1j | GEFPLSLVDR | 0.821 | Yes | No | ||
26 | H2A.L.1-H2al1j | FLPEGNHSGR | 0.445 | Yes | No | ||
27 | H2A.L.1-H2al1m | VTPEDVR | 0.216 | Yes | No | ||
28 | H2A.L.1-H2al1o | GELPLSLVDHFLR | 0.262 | Yes | No | ||
29 | H2A.L.2, Y-Chr H2A.L.3 | AELQFPVSR | 0.844 | Yes | Yes | Yes | |
30 | H2A.L.2 | FLREGNYSR | 0.289 | No | No | ||
31 | H2A.L.2 | IAPEHVCR | 0.438 | Yes | No | Yes | |
32 | H2A.L.2 | VVQNNEQLHQLFKa | 0.322 | Yes | Yes | ||
33 | Y-Chr H2A.L.3 | FLGEGIYSR | 0.433 | Yes | No | ||
34 | Y-Chr H2A.L.3 | IAPEHVCQVVQNK | 0.464 | Yes | No | ||
35 | H2A.P | NAPFSLFDEMPGPR | 0.673 | Yes | No | ||
36 | H2A.B.2 | NTENCLQR | 0.261 | Yes | No | ||
37 | H2A.B.2, H2A.B.3 | LLELAGNEAQR | 0.777 | Yes | No | ||
38 | Canonical H2B | KESYSVYVYK | 0.255 | Yes | Yes | Yes | PAp00035223 |
39 | Canonical H2B | ESYSVYVYK | 0.359 | Yes | Yes | Yes | PAp00066832 |
40 | Canonical H2B, TS H2B.1 | EIQTAVR | 0.331 | Yes | Yes | Yes | PAp00066243 |
41 | Canonical H2B, TS H2B.1 | LLLPGELAK | 0.517 | Yes | Yes | Yes | PAp00073476 |
42 | TS H2B.1 | KESYSIYIYK | 0.227 | Yes | Yes | Yes | PAp00379050 |
43 | TS H2B.1 | ESYSIYIYK | 0.311 | Yes | Yes | Yes | |
44 | subH2B | KLATLAVTFGSK | 0.608 | Yes | Yes | Yes | |
45 | subH2B | LATLAVTFGSK | 0.571 | Yes | Yes | Yes | |
46 | H2B.L.2 | NSFAIYFPK | 0.398 | Yes | Yes | Yes | |
47 | H2B.L.2 | SVNILDSFVK | 0.421 | Yes | Yes | Yes | |
48 | H2B.L.2 | IASEASFLAR | 0.728 | Yes | Yes | Yes | |
49 | H4 | DNIQGITKPAIRa | 0.845 | Yes | Yes | PAp00033165 | |
50 | H4 | RISGLIYEETRa | 0.548 | Yes | Yes | PAp00006681 | |
51 | H4 | ISGLIYEETRa | 0.667 | Yes | Yes | PAp00035058 | |
52 | H4 | VFLENVIRa | 0.259 | Yes | Yes | PAp00038639 | |
53 | H4 | DAVTYTEHAKa | 0.333 | Yes | Yes | PAp00039819 | |
54 | H4 | KTVTAMDVVYALKa | 0.505 | Yes | Yes | PAp00072198 | |
55 | H4 | TVTAMDVVYALKa | 0.402 | _ | Yes | Yes | PAp00008048 |