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Table 1 M(IFN-γ) and M(IL-4/IL-13) macrophage activation markers

From: Genome-wide profiling of transcribed enhancers during macrophage activation

M(IFN-γ) markers

M(IL-4/IL-13) markers

Gene (G1)

# enh. in E1

M(IFN-γ) marker enhancers in E1

Gene (G2)

# enh. in E2

M(IL-4/IL-13) marker enhancers in E2

Cd38

1

 

Arg1

1

chr10:25119065…25119466

Cxcl9

3

chr5:92368373…92368774, chr5:92369052…92369453, chr5:92374704…92375105

Ccl24

1

 

Cxcl10

4

chr5:92353639…92354040, chr5:92368373…92368774, chr5:92369052…92369453, chr5:92374704…92375105

Egr2

9

chr10:67595184…67595585, chr10:67598488…67598889, chr10:67628888…67629289, chr10:67636538…67636939, chr10:67694800…67695201, chr10:67695848…67696249, chr10:67712611…67713012, chr10:67713071…67713472, chr10:67715029…67715430

Cxcl11

5

chr5:92353639…92354040, chr5:92368373…92368774, chr5:92369052…92369453, chr5:92374704…92375105, chr5:92375350…92375751

Fn1

3

chr1:71938511…71938912

Nos2

1

chr11:78916390…78916791

Igf1

7

chr10:87731929…87732330, chr10:87753519…87753920, chr10:87805812…87806213, chr10:87830718…87831119, chr10:87832100…87832501, chr10:87839444…87839845

Ptgs2

1

 

Irf4

2

chr13:30714614…30715015

Socs3

3

 

Mrc1

2

chr2:14185406…14185807, chr2:14206798…14207199

Tnf

1

 

Socs2

2

chr10:95232562…95232963, chr10:95236240…95236641

  1. The columns list marker genes in G1 and G2, number of associated enhancers in the corresponding activation state, and potential activation marker enhancers