Table 1 ChIP-seq datasets
Feature | Cell line | Number of peaks | Filename at UCSC Genome Browser or GEO series number |
|---|---|---|---|
TAL1 | G1E-ER4 + E2 | 4,915 | wgEncodePsuTfbsG1eer4e2Tal1ME0S129InputPk.broadPeak.gz |
GATA1 | G1E-ER4 + E2 | 13,123 | wgEncodePsuTfbsG1eer4e2Gata1aME0S129InputPk.broadPeak.gz |
EP300 | MEL | 31,342 | wgEncodeSydhTfbsMelP300IggrabPkV2.narrowPeak.gz, wgEncodeSydhTfbsMelP300sc584IggrabPk.narrowPeak.gz |
SMAD1 | G1E-ER4 + E2 + BMP4 | 1,586 | GSE29193 |
H3K4me1 | G1E-ER4 + E2 | 105,231 | wgEncodePsuHistoneG1eer4e2H3k04me1ME0S129InputPk.broadPeak.gz |
H3K4me3 | G1E-ER4 + E2 | 72,495 | wgEncodePsuHistoneG1eer4e2H3k04me3ME0S129InputPk.broadPeak.gz |
H3K27me3 | G1E-ER4 + E2 | 53,587 | wgEncodePsuHistoneG1eer4e2H3k27me3ME0S129InputPk.broadPeak.gz |
H3K9me3 | G1E-ER4 + E2 | 69,929 | wgEncodePsuHistoneG1eer4e2H3k09me3ME0S129InputPk.broadPeak.gz |
H3K27ac | G1E-ER4 + E2 | 31,535 | GSE61349 |
DNaseI hypersensitivity | G1E-ER4 + E2 | 93,705 | wgEncodePsuDnaseG1eer4S129ME0Diffd24hPkRep1.narrowPeak.gz |