Skip to main content

Table 6 Analysis of total sequence tags obtained from normal colon, HeLa and SW480 CENP-A immunoprecipitations (IPs) demonstrates they are not enriched in repetitive elements

From: CENP-A nucleosomes localize to transcription factor hotspots and subtelomeric sites in human cancer cells

Tags a Normal colon % HeLa % SW480 %
Alu 334960 0.65 226475 0.65 216285 0.63
LINE 10749901 20.81 6808429 19.52 6340827 18.53
SINE 1034138 2.00 711621 2.04 700002 2.05
Centromeric α-satellite 633 0.001 1163 0.003 3871 0.011
# total tags 51651054 100.00 34875940 100.00 34212787 100.00
  1. Note: aAll sequences tags were extended to the length of 150 bp by strands to calculate overlapping.