Table 1 Features of Stylonychia H3 variants
Gene | 5′-telomere | 5′-sub-telomere | CDS | 3′-sub-telomere | 3′-telomere | Total | Intron | Protein | MW | Nuclear type | PTM | Sequence class | Piwi-dependent |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HIS31 | 20 | 728 | 417 | 283 | 36 | 1484 | NA | H3.1 | 15.59 | No | |||
HIS32A | 20 | 730 | 417 | 313 | 36 | 1516 | NA | H3.2a | 15.56 | No | |||
HIS32B | 20 | 727 | 417 | 313 | 36 | 1513 | NA | H3.2b | 15.59 | No | |||
HIS33 | 20 | 198 | 417 | 154 | 36 | 893 | 68: 399 to 466 | H3.3 | 15.75 | M, a1 to a3, e | Yes | ||
HIS34 | 20 | 169 | 411 | 240 | 36 | 876 | NA | H3.4 | 15.69 | Uncertain | |||
HIS35 | 20 | 233 | 417 | 255 | 36 | 961 | NA | H3.5 | 15.25 | M, a1 to a3, e | Uncertain | ||
HIS36 | 20 | 231 | 414 | 467 | 36 | 1168 | NA | H3.6 | 15.56 | ND | |||
HIS37 | 20 | 429 | 543 | 255 | 36 | 1283 | NA | H3.7 | 20.01 | a3, e | H3.7K3me3 (H3K4me3); H3.7K105ac (GVKacKPHR) | MDS loci | No |
HIS38 | 20 | 97 | 540 | 327 | 36 | 1020 | NA | H3.8 | 20.48 | m | H3.8K26me3 or H3.8K32me3 (H3K27me3); H3.8S27ph or H3.8T33ph (H3S28ph) | No |