Skip to main content

Table 1 Macronucleus specific primers for the N-ChIP analyses

From: A permissive chromatin structure is adopted prior to site-specific DNA demethylation of developmentally expressed genes involved in macronuclear differentiation

Position

Primer

Sequence

mdp1 5′

Piwi a

5′-CCGTAGTTTCAGAATTCGACAGG-3′

mdp1 5′

Piwi b

5′-GTTGAGGCCTCGACAACTTAAAA-3′

mdp1 3′

Piwi3′-UTR

5′-GTAGGGTCTCTCATCTCCTGTTCGC-3′

mdp1 3′

Piwif

5′-CTTGTCTGGTGTATCACCGATACCATC-3′

mdp2 5′

mdp2-1a

5′- CTTGTCTGGTGTATCACCGATACCATC- 3′

mdp2 5′

mdp2-b

5′-TGCTTGACTGAGTCGTCAGAAT-3′

mdp2 3′

mdp2-k

5′-AGAAGAGGAGGACCGAGTGG-3′

mdp2 3′

mdp2-l

5′-ATCAGTCTCTGAGGGAAATAGGC-3′