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Table 2 Top ten CTCFL-binding sites in induced ES cells

From: The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner

 

Chr

Position

Gene

CTCFL bound*

CTCF bound

1

6

34,872,000

Stra8

134

Yes

2

9

110,760,000

Tsp50

113

Yes

3

14

103,450,500

Irg1

105

Yes

4

9

106,114,000

Twf2

101

Yes

5

9

50,260,500

-

100

Yes

6

5

125,061,000

Tctn2

97

Yes

7

8

107,058,500

Nae1

95

Yes

8

2

29,475,000

Rapgef1

94

Yes

9

9

108,838,500

Uqcrc1

93

Yes

10

12

112,970,500

Bag5

92

Yes

  1. *Sites are ranked based on the number of ChIP-sequence reads, filtered for duplicates.
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Epigenetics & Chromatin

ISSN: 1756-8935