Table 1 Yeast and mammalian ATP-dependent chromatin remodeling proteins and complexes implicated in the DDR.

SWI/SNF

SWI/SNF

Snf2

Swi3, Snf12, Arp7, Arp9, Snf11, Snf5, Snf6, Swi1, Swp82, Taf14

Yeast

[157]

RSC

Sth1

Rsc1-4, Rsc6, Rsc8-, Rsc9, Rsc30, Rsc58, Rsc7, Arp7, Arp9, Sfh1, Htl1, Ldb7, Rtt102

Yeast

[157]

BAF

SMARCA4/BRG1, SMARCA2/BRM

ARID1A, SMARCC2, SMARCC1, SMARCD1-3, SMARCE1, ACTL6A, SMARCB1/SNF5, BAF45a-d, BRD7, BRD9, ACTB

Mammal

[17, 157]

PBAF

SMARCA4/BRG1, SMARCA2/BRM

ARID2, PBRM1, SMARCC2, SMARCC1, SMARCD1-3, SMARCE1, ACTL6A, SMARCB1/SNF5, BAF45, BRD7, BRD9, ACTB

Mammal

[157]

INO80

INO80

Ino80

Arp4, Arp5, Arp8, Act1, Rvb1, Rvb2, Taf14, Ies1-6, Nhp10

Yeast

[158]

SWR1

Swr1

Arp4, Arp6, Act1, Rvb1, Rvb2, Yaf9, Vps71, Vps72, Swc3-5, Swc7, Bdf1

Yeast

[17, 158]

INO80

INO80

RUVBL1, RUVBL2, ACTL6A, ACTR5/Arp5, ACTR8/Arp8, INO80B, INO80C, TFPT, NFRKB, MCRS1, INO80E, INO80D

Mammal

[17]

TRRAP/Tip60¹

EP400/p400

RUVBL1, RUVBL2, KAT5/Tip60, ACTL6A, ACTB, YEATS4, DMAP1, VPS72, BRD8, MORF4L1, MORF4L2, MEAF6, C20orf20, EPC1, EPC2, ING3

Mammal

[17]

CHD

NuRD

CHD3, CHD4

MBD2, MBD3, MTA1-3, HDAC1, HDAC2, RBBP7, RBBP4, GATAD2A, GATAD2B

Mammal

[17, 159]

CHD2²

Mammal

[137]

ISWI

ISWIa

Isw1

Ioc3

Yeast

[160]

ISWIb

Isw1

Ioc2, Ioc4

Yeast

[160]

ISW2

Isw2

Itc1, Dpb4, Dls1

Yeast

[17, 160]

ACF

SMARCA5/hSNF2H

BAZ1A/hACF1

Mammal

[17, 160]

CHRAC

SMARCA5/hSNF2H

BAZ1A/hACF1, CHRAC1, POLE3

Mammal

[17, 160]

WICH

SMARCA5/hSNF2H

BAZ1B/WSTF

Human

[17, 160]

NURF

SMARCA1/hSNF2L

BPTF, RBBP7, RBBP4

Mammal

[17, 160]

Uncategorized

Rad16

Yeast

[48, 49]

Rad26

Yeast

[161]

Rad5

Yeast

[162]

Rdh54

Yeast

[163, 164]

CHD1L/ALC1

Mammal

[132, 133]

ERCC6/CSB

Mammal

[165]

HLTF

Mammal

[166, 167]

RAD54L

Mammal

[90, 168]

RAD54B

Mammal

[169–171]

SHPRH

Mammal

[167, 172]

SMARCAL1

Mammal

[173, 174]