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Table 2 Mouse embryonic stem (mES) CCCTC-binding factor (CTCF), RNA polymerase II (RNAPII) and CTCF-RNAPII site intersections with small RNAs (sRNAs)

From: The relationship between transcription initiation RNAs and CCCTC-binding factor (CTCF) localization

 

Total number of mES sites

Number that overlap with sRNAs (%)

Total number of sRNAs overlapped (percentage total sRNAs)

RNAPII

8,421

575 (7)

1,775 (3)

CTCF

13,469

589 (4)

981 (1.5)

CTCF + RNAPII

434

86 (20)

186 (0.3)