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Table 1 Primer sets used in the experiments

From: Dynamic instability of genomic methylation patterns in pluripotent stem cells

Name

Sequence 5'→3'

Nested primers for bisulfite analysis of Mo-MLVGFP long terminal repeat

GFPF1

TTTTTTTATATATTATTATTTATTTTTTTT

GFPR1

ATCAATCACTCAAAAAAAACCCTC

GFPF2

TAGGGTTAAGAATAGATGGAATAGTTGA

Bisulfite analysis of Oct4 promoter

Oct4F1

TGAGGAGTGGTTTTAGAAATAATTG

Oct4R1

AAACCAAATATCCAACCATAAAAAA

Oct4R2

CCAACCATAAAAAAAATAAACACC

Mo-MLV42bp/GFP creation1

Forward

TTATACTCCTCCACACACCATCACTCACTCTTTCTCAATCCA

Reverse

TGGATTGAGAAAGAGTGAGTGATGGTGTGTGGAGGAGTATAA

  1. 1Moloney murine leukemia virus (Mo-MLV)42bp/GFP was created by inserting this synthetic oligonucleotide into the U3 region of the Mo-MLV long terminal repeat.