Fig. 4

Flag and CP190 ChIP-seq signal depletion in the Pita^ΔCP1+2 line. a Log₁₀ of the average FLAG and CP190 signal (RPKM) in FLAG peaks that intersect with Pita motif sites (N = 1029), ranked according to the average FLAG signal in Pita^wt and Pita^ΔCP1+2 lines. Peaks with enhanced FLAG signals in Pita^wt are marked with black circles (N = 44). The black line shows the average curve shape obtained in Pita^wt lines for FLAG and CP190 signals. b Examples of CP190 signal depletion in the Pita^ΔCP1+2 line among FLAG peaks with and without FLAG signal depletion in the Pita^ΔCP1+2 line (RPKM)